KEGG   Neofusicoccum parvum: UCRNP2_8640
Entry
UCRNP2_8640       CDS       T03126                                 
Name
(GenBank) putative wd repeat protein
  KO
K14962  COMPASS component SWD2
Organism
npa  Neofusicoccum parvum
Pathway
npa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    UCRNP2_8640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npa03019]
    UCRNP2_8640
   03036 Chromosome and associated proteins [BR:npa03036]
    UCRNP2_8640
Messenger RNA biogenesis [BR:npa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     UCRNP2_8640
Chromosome and associated proteins [BR:npa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     UCRNP2_8640
    COMPASS/SET1 complex (yeast)
     UCRNP2_8640
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EIPR1 WD40_Gbeta WDR55 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 WD40_RFWD3 PAC11 WDCP Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-ProteinID: EOD44646
UniProt: R1G8Z7
LinkDB
Position
Unknown
AA seq 358 aa
MAAGATPTTGGAPPTQKVSDVIAAFRPTRCFRPDNKETAVTSLDFDDSGELAIVARDDDT
LQIYNCKEGKHAKELKSQKYGVHLARFTHHAQSIIYASTKVDDGIRYLSSHDNSYIRYFK
GHTDTVTCLALNPSNDTFISCSQDNTVRLWALNSPNTQGLLKLHAPHLAAYDPSASVIAI
ASPPTQTILLYDVRNFDKPPFATFDLHDFEQQYTPGSAGRNWAKLEFSNDGKCLVLGTTG
PGHFALDAFDGALKHFCLRDSGPSGRRAAGEYAAPGTVAGQGDMCLSPDGQYLIGGSGVD
GLLVWDLHENTSSDRILRPYTDLPGPGKAAVVGYNQRMNLVCTADRDFMIWLPDPDAV
NT seq 1077 nt   +upstreamnt  +downstreamnt
atggccgccggcgcaacccccaccaccggcggagctccgccgacccagaaggtcagcgat
gtgatagctgcatttcgccctacccgctgcttccgacccgacaacaaggagaccgctgtg
acgtcgcttgactttgacgactcgggcgagctggccattgttgcccgcgatgacgacacg
ctgcagatctacaactgcaaagaggggaagcatgcaaaagagctcaagagccagaagtac
ggcgtgcatctggcccgcttcacccaccacgcccagagcatcatctatgccagcacaaag
gtagacgacggcattcgctacctgtcgtctcacgacaactcgtacatccgctacttcaag
ggccataccgacaccgtcacctgccttgccctcaacccctccaatgataccttcatctcg
tgctcccaggacaatacggtgcgcctgtgggcccttaactctcccaatacgcagggcctg
ctcaagctgcatgctccccacctcgccgcctacgacccctctgccagcgtcattgccatc
gcctctccccccacacagaccatcctcctatacgacgtccgcaatttcgacaagccaccg
ttcgcaacattcgatctgcacgactttgagcagcagtacacccctggctcggctggccgc
aattgggcgaagctggagttctccaatgacggcaagtgtctggtgcttggcacaaccggg
cccggccactttgccctggacgcctttgacggcgctctcaagcatttctgcctgagagat
tcagggccctcgggacgtcgtgctgcaggagagtatgcggcgccgggcacagtagctggg
caaggcgacatgtgtctctctccagacggccaatacctgatcggcggctcgggcgttgac
ggcctgctggtgtgggatctgcacgaaaatacatcgtccgatcgcatcctgcggccttat
accgaccttcctgggccaggcaaagcagctgtggtgggctacaaccagcgcatgaacctg
gtgtgtactgcggacagagacttcatgatttggctaccggacccggacgcggtttaa

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