Neofusicoccum parvum: UCRNP2_865
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Entry
UCRNP2_865 CDS
T03126
Name
(GenBank) putative pre-mrna splicing factor rna helicase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_865
03009 Ribosome biogenesis [BR:
npa03009
]
UCRNP2_865
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRNP2_865
Spliceosome [BR:
npa03041
]
Complex A
U2 snRNP components
U2 related factors
UCRNP2_865
Complex B
UCRNP2_865
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
UCRNP2_865
Ribosome biogenesis [BR:
npa03009
]
Eukaryotic type
90S particles
Helicases
UCRNP2_865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_19
SRP54
Flavi_DEAD
ResIII
T2SSE
AAA_7
AAA_23
Motif
Other DBs
NCBI-ProteinID:
EOD52336
UniProt:
R1GVD1
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MADRRPDGDESRAKRQKTAAEMDPKANPYLAHMYQDAHANGASSNKGFAKLVRHQTTSAD
ARAAEDGPSNPFTSQPLSKKYFDILKFLQMFQSTQILVFVGETGSGKTTQIPQFVLFDDL
PQSQAKMVACTQPRRVAAMSVAQRVADEMDVSLGEEVGYSIRFEDRTSSKTILKYMTDGM
LLREAMNDHSLSRYSTIILDEAHERTLATDILMGLLKEVVQRRPDLKLVIMSATLDAQKF
QRYFNDAPLLAVPGRTHPVEIFYTAEPERDYVEAALRTVLQIHASEPEGDVLLFLTGEEE
IEDACRKISLEADELTREADAGPLKVYPLYGTLPPHQQQKIFEPAPPPRTPGGRPGRKVI
VSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRP
GKCFRLYTESAFKKELIEQTYPEILRSNLSATVLELKKLGVEDLVHFDLMDPPAPETLMR
ALEELNYLACLDDEGELTALGRLASDFPLDPALAVMLISAPEFYCSNEILSLVALLSVPQ
IFVRPASARKRADEMKDLFAHPDGDHLTMLNVYHAFKSDDAQANPKQWCHDHFLSYRALQ
QADNVRLQLKRIMERSEIELMSTPFEDKKYYENIRRALVSGFFMQVAKRDGTGKTYITIK
DDQNVLLHPSTVLGHDSEWVVYNEFVLTTKNYIRTVTSVKPEWLLDIAPNYYDIATFKKG
DIKNALQRTVDKMRRRDAIKGKR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgcaggcccgacggcgatgagagccgcgccaagcgccagaagaccgccgcc
gaaatggaccccaaggccaacccgtacctcgcccacatgtaccaggacgcccacgccaat
ggcgcctccagcaacaagggcttcgccaagcttgtccgccaccagaccacctcggcagac
gccagggctgctgaagatggccctagcaaccccttcaccagccagccgctgtccaagaaa
tacttcgacatcctaaagttcctgcagatgttccagagcacccagatcctcgtcttcgtc
ggtgagacgggttccggaaagacgacccagatcccgcagttcgtgctgttcgacgacctc
ccgcagtcgcaggccaagatggtcgcctgtacccaaccgcgtcgtgtcgctgccatgtcc
gttgcccagcgtgtcgccgacgagatggacgtctccctgggcgaggaagttggttacagc
atccgtttcgaggaccgcacgtcgagcaagaccatcctcaagtacatgacggacggtatg
ctgctgcgcgaggccatgaacgatcatagcctgtctcgctacagtaccatcattctcgac
gaagcccacgaacgtactctggctaccgatatcctgatgggtctgttgaaggaggtggtc
cagcgcagacccgacctcaagctggtaatcatgtctgccaccctggatgctcaaaagttc
cagcgctacttcaacgatgcccctctgcttgcggttcctggtcgtacccaccccgtcgaa
attttctacactgccgagcctgagcgagactacgtagaggctgctctgcgcaccgttctg
cagatccacgcgtcagagcccgagggtgacgtgctgcttttcttgactggtgaggaggag
attgaggatgcgtgcaggaagatcagcttggaggcagacgaactcacgcgtgaggccgac
gcgggcccgctcaaggtgtacccgctgtacggcacccttcccccgcaccagcagcagaag
attttcgagcccgctcccccgccgcgcactcctggtggccgtcctggccgcaaggtcatc
gtgtcaaccaacattgccgagacgtcacttaccatcgacggtatcgtctacgttgtggac
cccggcttcagcaagcaaaaggtctacaatccccggattcgtgtggagtctcttctggtc
tctcctatctccaaggcctctgcccagcagcgtgccggtcgtgccggtcgtaccagaccc
ggaaagtgcttccgtctctacaccgagtctgctttcaagaaggagctcattgagcagacg
tacccggaaattctccgctctaacctgtcggctactgttttagagctgaagaagcttggc
gtcgaggatctcgtccatttcgaccttatggaccctccagcccccgagacgctgatgcgt
gctctggaggaattgaactatctggcctgcctggatgacgaaggcgagctcactgcgctt
ggtcgcctggcgtctgacttcccgcttgatccggctctcgcagtcatgctcatttcggca
ccagagttctactgctccaatgagattctctccctggtggctcttctttccgtcccgcag
atatttgtccgtccggccagtgctcgcaagcgggcggatgagatgaaagatctctttgct
caccccgacggcgaccacctcacaatgctgaatgtctaccacgctttcaagtcggatgat
gcccaggcgaatccgaagcagtggtgccacgaccatttcttgtcgtatcgtgctctccaa
caggccgacaacgttcgtctccagctcaagcgtatcatggagcggtccgagatcgagctt
atgtcgactcccttcgaggacaagaagtactatgagaacattcgccgtgcacttgtcagt
ggcttcttcatgcaagtcgccaagagggatgggactggcaagacgtacatcactatcaag
gatgaccaaaatgtcctgctgcacccgtcaacagtgctcggccacgacagtgagtgggtt
gtgtacaacgaatttgttcttaccaccaaaaactacatccgcactgtcacgtcggtcaag
cctgagtggctactggatattgcgcccaactactacgacatcgccaccttcaagaagggc
gacatcaagaacgctcttcagcgcaccgtcgataagatgagacgtagagatgccatcaag
ggcaagcgctga
DBGET
integrated database retrieval system
