KEGG   Neofusicoccum parvum: UCRNP2_8650
Entry
UCRNP2_8650       CDS       T03126                                 
Name
(GenBank) putative small nucleolar ribonucleoprotein complex protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
npa  Neofusicoccum parvum
Pathway
npa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    UCRNP2_8650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npa03009]
    UCRNP2_8650
Ribosome biogenesis [BR:npa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    UCRNP2_8650
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WDR55 Beta-prop_EML WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WDR90_beta-prop_4th ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_SPT8 PQQ_2 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_HPS5
Other DBs
NCBI-ProteinID: EOD44633
UniProt: R1EA20
LinkDB
Position
Unknown
AA seq 358 aa
MDIHRSRFVPYPAAAINALAFSYSDSRDTGKGAGNVRLAIGRANGNIEIWNPGKEGEWIQ
ELTLAGGKDRSVEGLAWIQEPDEESEGGFTEIGRLRLFSIGYSSTVTEWDLVTGLPLRHS
SGNHSEVWCLAAQPCWKHGQKGQKDGEFRGQNLVAGCADGTLAVLSTAENDLRFQRFLSR
PTAKKARVLSVTYQNRDIVVAGFADSAVRVFDSRNGQLLRNITLGAPTIAGPRETLVWAV
KCLPNGDIVSGDSTGEVRFYDGKNFSLLQRISSHQADVLDIAVSRDGKTVFSGGMDQRTT
VFTMSGSGPDKRWTESGHRRFHDHDVKTMATFESKRLSVMVSGGKVNMYYVLTHVLTM
NT seq 1077 nt   +upstreamnt  +downstreamnt
atggatatccaccgttcgcgcttcgtcccgtacccggcggccgcaatcaacgccctcgct
ttctcctactccgattctcgggataccggtaaaggcgctggtaacgtgagactcgcgatc
ggccgtgcgaacggcaacatcgagatttggaaccctggcaaggaaggagaatggatccaa
gaattgacactcgctggcggcaaggaccgcagtgtggagggacttgcatggatacaagag
ccagacgaggagagcgagggcggattcaccgagattggtcgcttgcgcttgtttagcatt
ggctactcgagcaccgtgaccgagtgggaccttgtcaccggcctgcctctgcgacactcg
agcggcaaccacagcgaagtctggtgtcttgccgcgcaaccgtgctggaagcatggccag
aaaggtcagaaggatggtgagttccgcggtcagaaccttgtcgctggatgcgccgacggt
acgctcgccgttctttccaccgccgagaacgatctgaggtttcaacgattcctctcgcga
cccactgcaaagaaggcgcgcgttctcagtgttacgtaccagaacagagacattgtggtt
gctggcttcgccgacagtgcagtcagagttttcgattcaaggaacggccagctcctccgg
aacatcaccttaggagcacccacgattgcgggaccccgagaaaccctggtctgggctgtc
aagtgtcttccgaatggtgacatcgtatcaggcgactctactggggaagttcgattctac
gatggcaaaaacttttcactcctgcagagaatctcctcgcatcaagccgacgttctcgat
attgcagttagcagggatggaaagacggtgttcagcggaggtatggaccagcgtacgacc
gtcttcaccatgtctggtagcggccctgacaagagatggactgagagcggccatcggagg
ttccacgatcacgacgtgaagaccatggcgactttcgagagcaagaggctcagcgtcatg
gtctcaggaggtaaggtcaacatgtactacgtcctgacccatgtgctaacaatgtga

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