Neofusicoccum parvum: UCRNP2_8817
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Entry
UCRNP2_8817 CDS
T03126
Name
(GenBank) putative u4 u6 small nuclear ribonucleo protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_8817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_8817
Spliceosome [BR:
npa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
UCRNP2_8817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-ProteinID:
EOD44470
UniProt:
R1FZB2
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MVEKRPYPDDHGDYKRPRSNNASPAPPANGAGARPDISKAIAEARARAAAVKAKLQAQNG
SSASPSPSPAPGTPGTPAAASPPPAQSAADAARLKIEQMKARVAAATKKVAPPTQQAPEF
EDSSSRARGGLAIGLHPALMDTGSSSGSARGKTAIQPKFATTMANRRESPGQRDKKQLDL
SGPSLEELKKNPYYDPNVSGLMGKTRAPKQLAFNQKGKFIQQANALRRQAALEQMKKRIA
EQAKKVGLEENADKHFLTPAPPEVEWWDEGLVGSEYNLEKAKFEGPDSIVTIYVQHPVLL
EPPQDKKNPGLKPLPLTKTEQAKLRRQRRMAEHKEQQAKIRLGLEPPPPPKVKKSNLMRV
LGEQAVKDPTAVEARVNREIAERAAKHEEENHSRMLTKEERHEKLARQQEVDSSKGISVC
VFKVENLSFGKHRYQIDIHAKQNALTGITILNPKFNLIIVEGGAHSIKNYKKLMLQRVKW
TENAMPQSVREGNREAEAAWLQSVDEKGELRDLSYNKCTLVWEGEVRDRAFRKWFGLKPC
ETDSEAKDALTRSKMENMWTLAKTFQE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggttgagaagcgcccctaccctgacgaccatggcgactacaagcgcccccgctcgaac
aacgcctcgccagcgccgcccgcgaacggagctggcgcgaggcccgacatctccaaggcc
atcgccgaagcacgcgcccgcgccgccgctgtgaaggcgaagctgcaggcccagaatggc
tcctctgcgtctccctcgccctcgccagctccaggtacccccggcacgccggctgcagca
tctccgccgcctgcccagagcgccgcagatgctgcgcgtctgaagatcgaacagatgaag
gcccgcgtggccgccgccacgaagaaggtcgcaccgccgacacagcaggccccggagttc
gaggattcgtcatcacgcgcgaggggtggattggccataggcttgcaccctgctctgatg
gacacgggttcgagctccggctcagccagagggaaaacggccatccagccaaagtttgcg
acaacaatggcgaacagacgggagtcgccgggtcagagagataagaagcagctagatctg
tcggggcccagcttggaggagttgaagaagaatccttattacgacccaaatgtctcaggg
ctcatggggaagacgagggcgcccaagcagcttgccttcaaccagaagggcaagttcatc
cagcaggccaatgctttgcggcggcaagcggcgcttgagcagatgaagaagaggatcgcg
gagcaggctaagaaggttggtctcgaggagaatgcagataagcatttcttgacaccagct
ccgccggaagtcgagtggtgggacgaaggactggtcgggtcggaatacaaccttgaaaag
gccaaattcgaaggacctgactccattgtcacgatttacgtccaacaccccgtacttcta
gagccgcctcaggacaagaagaaccctgggctcaagccgctacctctcacgaagaccgaa
caggcaaagcttcgtcgacagcggcgtatggctgagcataaggagcagcaagctaagatt
cgtctgggattggagcctcctccgccgcctaaagtcaagaagagcaatctcatgcgcgtg
ttaggagaacaggcggtgaaggatccgacggcagttgaagcccgcgtgaatcgtgagatt
gccgaacgggcggcgaagcacgaagaggaaaaccattctcgcatgcttaccaaagaagaa
cggcacgagaagctagcaagacaacaagaagttgattcgtctaaaggcatttcggtgtgc
gtattcaaggtcgagaatctaagcttcggcaaacacagataccaaatcgacatccacgcc
aagcagaacgctttgacgggcatcaccattctcaatcctaaattcaacctcatcatcgtc
gagggcggcgcgcacagcatcaagaactacaagaagctgatgcttcagcgcgtcaagtgg
acggagaatgccatgccacaaagtgtgcgagaaggcaaccgcgaggcagaagcagcatgg
ctgcagtcggtcgacgagaagggcgaactccgagacctgagctacaacaagtgcacgcta
gtctgggagggtgaggtgagagaccgtgcgttcaggaagtggtttggactcaagccgtgc
gagacggattcggaggcgaaggacgcactgacaaggtcgaagatggagaacatgtggacg
ctggcgaagaccttccaggagtag
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