Neofusicoccum parvum: UCRNP2_8818
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Entry
UCRNP2_8818 CDS
T03126
Name
(GenBank) putative dna-directed rna polymerase i subunit protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UCRNP2_8818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_8818
Enzymes [BR:
npa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UCRNP2_8818
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
UCRNP2_8818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-ProteinID:
EOD44463
UniProt:
R1E9K8
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
MAPNTGMNIADPVSSAISGVSFGFLDPTEVRALSVKRIVNANTFDSLGHAIPNGLHDLAL
GAFMGAPLRLIHHGLLKEAAEIGDIEAPKVKGSNEEGEDVESEDSDAGTQDLIQKREAYV
KRALKAAGFRSKGDGLDKRTEAVAEERRFVVKDFLADINKNRKCASCGGISPSFRKDRFA
KIFKKGLSKKDKNSMIQKGIKTRAPIVEEMARKQSLQASKNKHDSARMDIDEGVADMEEE
GSEDGESLDADEEIAGGLVADMASTKQKKKSEEDGEGQSYVSSTEVKYSLDRLFEKEQDI
LGHVYGPQTRREKNGKITAQMFFISALIVPPSKYRPEAKTGDSIAEAQVNSLYKGILNAC
DKINQISQEVKTGSNSIEGRRARTYDDLANASVELQDAVNSLIDRDRNPVQGAAGKRNED
GIKQKLEKKEGLFRQNMMGKRVNFAARSVISPDPNLEVNEIGVPPVFAQKLTYPEPVTHV
NWYELKEAVLNGERTLRMHYANCNTYNADFDGDEMNMHLPQNELARAEAATIADADHQYL
SATAGNPLRGLIQDHISMGVALTNKDTFFSREDYHQLLPETHGDLTFTSKSQTSADRWGK
GSEEATVIFKDGHLLTGIMDKKQIGPASGGFVNAVYEAYGHTAAGRVLSALGRLLTKVLH
MRAFSCGVEDLVLTAEGEKARRQALHDAETIGLEVASKYVSLNSKNSRSDNPELLRRLET
VLRDDSKQHGLDQLTNSATGKVSSAVTSACLPDGLIKPFPKNQMQAMTGSGAKGSQVNAN
LISCNLGQQVLEGRRVPVMVSGKTLPCFKPFESSVRAGGYIVDRFLTGIRPQEYYFHTMA
GREGLIDTAVKTSRSGYLQRCLIKGMEGLKVHYDTSVRDSDGSMVQFLYGEDGLDPTKEK
YLKDFKFTAENFDSVLESMGIRGHFGKISSEEASEYNKLAYKKYKKTGNLGATDPATSQY
WPSTHSGSTSESFYAVKKKYVDENPDKLIKDKRQNIDTGLSKKTFNATLDAKYLRSLIEP
GEAVGVVAGQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASAKISTPGMTLQ
LNEEISREEGERFAKGISRLSLAEIVDDVSVSETLGKGVAYSQAKIYKIRLNFFPSEEYC
KEYAITIKDVERAIETKFLLRLRKLIRDLLKKKGQEKTLKASAKSDALPDIGKSSRTVKQ
HQGRPQAEKEGADEGDGGDDDVDDDDDEDEEDATGSKQKANRSENTSYEKPDDEEEAIAA
EGRRRDATPDPMEDETYGGSPRETSDDDSESESEARPSKVNKAVASEREQRVLSKLEDVT
SFKFDDAHGQWCEVVFEYDVSTAKLLMLHLVETACKDAVIQSIPGLKGCVATSEKIDGED
TNVVLTEGVNLLAMRDYQDVINPHKLHTNDIVSVLRLYGVEAARANIVREMSGVFSGHGI
SVDNRHLNLIADVMTRGGGYTPFNRMGLKSNVSPFMKMSFETTVGFLKDAVLEEDVDTLD
NPSARIVVGKINNVGTGSFDVLMPVA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaacacgggcatgaacatcgcggaccccgtctcgagcgccatctctggtgtc
tcgttcggtttcttggatcccacggaagtcagggcactcagcgtgaagcgcatagtcaat
gcgaacacgtttgatagcctagggcatgccatacccaatggattgcatgacctcgcgctc
ggcgcattcatgggagctccgctacgcctgatacaccatgggctgctgaaggaggctgcg
gaaatcggcgatatcgaggcccctaaggtgaagggttcaaacgaggagggtgaggacgta
gagtccgaggacagtgacgctgggacacaggaccttatccagaagcgcgaggcctacgtg
aaacgcgctctgaaggctgctggcttccgtagcaagggagacgggctggacaagagaaca
gaagcagttgctgaggagcggaggttcgtcgtcaaggatttccttgcggatattaacaaa
aaccgaaaatgcgcaagctgtggcggaatttcgccctcgttcaggaaagaccgctttgcc
aagattttcaagaagggtctgagcaagaaggacaagaactccatgattcagaagggtatc
aagacaagggctccaattgtcgaggagatggcaagaaaacagtcacttcaagcctcgaag
aacaagcacgattcggcccgcatggacatcgatgagggcgttgctgatatggaagaagag
ggctcggaggacggcgagtcgctcgacgcagatgaagagattgctggcggcctggtggca
gacatggcctcaaccaagcaaaagaagaagagcgaggaggatggcgagggccagtcgtac
gtgagctcaacagaggtcaagtatagcttggacagattgtttgagaaggagcaggatatc
ttgggtcacgtctatgggccccagacccgcagagagaagaacgggaaaatcactgcccaa
atgttcttcatttctgctctcatcgttcctccgagcaaatacagaccagaggccaagacc
ggagattcgattgccgaagcacaggtcaattccctgtacaaaggcatcctcaatgcatgc
gacaaaataaaccagatctctcaggaagtcaagactggctccaacagtattgagggtcgg
agagccagaacgtacgatgatctggccaatgcctccgtggaactccaggatgcggtcaac
agtctaattgatcgggaccgcaatccagtacagggcgccgccggcaagcgaaatgaggac
ggcatcaagcagaagcttgaaaagaaggagggtctgttccggcagaatatgatgggtaag
cgtgtcaattttgccgcccgttcggtcatctcgccagatccaaacctggaggtcaacgaa
attggtgttccgccagtctttgcccagaaattgacctatcccgagccggtcacccacgtc
aactggtacgagctgaaggaagctgtgttgaacggagagcgcactctccgcatgcattac
gcgaattgcaacacgtacaatgctgatttcgacggagatgagatgaacatgcatcttcct
caaaacgaattggcccgtgctgaggcagctaccattgcagacgccgaccatcagtatctt
tctgccacggctggtaaccccctgcgtggtcttattcaagatcacatttctatgggcgtt
gccctgacgaacaaggacactttcttcagtcgtgaagactaccaccagctcttacccgag
acccacggtgaccttacattcacatcaaagtctcagacctcagccgatcgatggggtaag
gggtctgaagaggcaactgtcatattcaaggatggccatctgttaacgggaatcatggac
aagaagcaaattggccctgccagtggtggttttgtcaacgcagtctacgaagcttacggg
cacactgcggctggccgtgtgctgagtgccttgggcagactgttgacgaaggtcctgcac
atgcgggctttctcctgcggtgtggaagacctggtattgacagccgagggagaaaaagct
agaaggcaagctcttcacgatgcggagaccatcggcctcgaagttgcatcgaagtatgtc
tctttgaacagcaaaaactcccgatccgacaatcccgagctcctcaggcgtcttgagaca
gtgttgcgtgacgattcgaagcagcacggcctcgaccagctcaccaactcggccactgga
aaagtgtcatcagcagtgacctcagcctgtctcccggatggcttgattaagcctttcccg
aagaatcagatgcaggcgatgactggatcaggtgcaaagggttcccaagttaacgcaaac
ctcatctcctgcaaccttggccaacaggttctggaaggtaggcgtgtgcctgtcatggtt
agcggtaagacgttgccatgctttaagccattcgagtcaagcgtcagagccggcggttac
attgtcgatcgtttcttgaccggtatccggcctcaggagtactatttccacaccatggcc
ggtcgtgagggtttgatcgacactgctgtcaagacctcgcgttccggatacctgcaacgc
tgtctcatcaagggtatggagggtctcaaggttcactacgacacaagtgttcgtgactct
gacggctcgatggtccaattcttgtacggcgaagatggtcttgaccccaccaaagagaag
tatctcaaggatttcaaattcaccgcggagaactttgattccgtgcttgaatctatgggc
atccgaggacatttcggcaagatctccagtgaggaggccagcgaatacaacaagctcgcc
tacaaaaagtacaagaaaactggtaaccttggcgctactgaccctgccacctcacaatat
tggccgtcaacccactccggaagtacatctgagtctttctatgcggtgaagaagaaatat
gtcgatgaaaatcccgacaagctcatcaaggacaagagacagaatattgacacagggctc
tccaagaagacattcaatgctacgcttgatgctaagtacctgaggtctctcatcgagccc
ggagaggctgtcggtgttgttgcaggacagtcaattggtgagccgtctacccagatgaca
ctgaacactttccatttggctggtcactcggccaagaacgtcacgctcggtatccctcgt
ctccgcgagatcgtcatgacggcttctgcaaagatatcgacgcctggtatgacgttgcaa
ctgaacgaggagatttcccgtgaagaaggcgaacgcttcgcgaagggcataagccggttg
tctcttgccgagatcgtcgatgatgtttccgtcagcgagactcttggaaagggcgtagct
tactctcaagcgaagatttacaagatccgtcttaacttcttcccgtccgaggagtactgc
aaagagtatgccattaccatcaaggatgtggagcgtgcgatcgaaaccaagttcctcctc
aggcttaggaagctcatccgcgatttgctcaagaagaagggtcaggagaagacgctgaag
gcttcagcgaaatccgatgctctccctgatatcggcaagtcctctcgtacggtcaagcag
catcaaggccgccctcaagccgaaaaggaaggcgcagatgaaggtgatggcggtgatgac
gatgtcgatgatgatgatgatgaggacgaggaggatgcgacgggctcgaaacagaaggcg
aatcgctccgaaaacacatcatacgagaagcccgacgacgaagaagaagccattgccgct
gaagggcgccggagagacgccacacctgaccccatggaggacgagacgtacggtggcagc
ccacgggagacctctgatgacgactccgagagtgagtccgaggcgcggcccagcaaagta
aacaaggcagtagcttcggaacgagagcaacgggtgctttccaagctggaagacgtgaca
tcattcaaattcgacgatgctcacggccaatggtgcgaagttgtcttcgagtatgacgtc
tcgactgctaagctcctgatgctgcacctcgtcgagactgcttgcaaggatgcagtcatc
cagtccattcctggattgaagggctgtgttgccacctcggaaaagatcgatggcgaggac
acaaatgttgttctgaccgaaggcgtcaacctcttagccatgcgcgactaccaggatgtc
atcaacccgcacaagcttcacaccaacgacattgtgtcggtccttcgcttgtacggtgtc
gaggccgctcgcgccaacatcgtccgcgagatgtcgggcgtcttcagcggtcacggcatc
tcggtcgacaatcgtcacttgaaccttatcgccgatgttatgaccaggggtggtggctac
acgcccttcaaccgcatgggactcaagagcaacgtttctccatttatgaagatgtcgttc
gagaccactgtgggattcttgaaagatgccgtgctcgaggaggacgtcgacacgctggac
aaccccagtgcacgcattgtggttgggaagatcaacaacgtgggcacgggttcgtttgac
gtgctgatgccggtggcttag
DBGET
integrated database retrieval system
