Neofusicoccum parvum: UCRNP2_8933
Help
Entry
UCRNP2_8933 CDS
T03126
Name
(GenBank) putative histidine triad nucleotide binding protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UCRNP2_8933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_8933
Enzymes [BR:
npa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
UCRNP2_8933
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
UCRNP2_8933
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
UCRNP2_8933
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
UCRNP2_8933
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
UCRNP2_8933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Msb1-Mug8_dom
Motif
Other DBs
NCBI-ProteinID:
EOD44364
UniProt:
R1GEK6
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MSRKQPKPSGTASKGSRKSTTVGTRVFPGMYGLGAYINHPEQFGPERVIDYNDNFVVIND
LFPKSVIHCLVLPRDQQKTLVHPFEAFEDAQFLEACKAEAERVKKMVASELRRKYGRFSK
QEQTRIAAMESESPPDEANLPPGRDWATDLLAGIHAGPSMANLHIHVLSPDRHSACLKHR
KHYNSFSTPFLIPLDAFPLAADDPRRRPGEAGYLNRDFLCWRCQQNFGKDVKRLKTHLSE
EFGQWKSE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaaagcagcccaagccctcgggcacggcatccaagggaagccgcaagtccacc
accgtcggcactagagtgttccccggcatgtatggcctgggcgcctacatcaaccacccc
gagcaattcgggcccgagagagtgattgactacaacgacaatttcgtcgtcattaatgac
ctcttcccgaagtctgtgattcattgcctggtcctgccgcgtgatcagcagaagacgctc
gtgcacccgttcgaggcgtttgaggatgctcaatttcttgaagcttgcaaggccgaggcg
gaaagagtcaagaagatggtggccagtgagctccgccgaaagtacgggcgcttctccaaa
caagaacagacgcggatagcggcaatggaatcggaaagtccgccggacgaggccaaccta
ccccccgggcgggactgggccacggatctcctcgccggaatacatgctggcccatccatg
gccaacctgcacatccatgtcctctctccagaccggcattcggcctgcctgaaacaccgg
aagcactacaacagcttctcgacgccgttcctcatcccattggacgcgttcccgctggcg
gcggacgacccaagaagacgcccgggcgaggcgggctatctgaacagagacttcctgtgc
tggcggtgccagcagaatttcggaaaggacgtgaagcggctgaagacacatctcagcgag
gagtttgggcagtggaagagcgagtag
DBGET
integrated database retrieval system
