Neofusicoccum parvum: UCRNP2_9222
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Entry
UCRNP2_9222 CDS
T03126
Name
(GenBank) putative atp-depentend dna protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03420
Nucleotide excision repair
npa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UCRNP2_9222
03430 Mismatch repair
UCRNP2_9222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_9222
Enzymes [BR:
npa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UCRNP2_9222
DNA repair and recombination proteins [BR:
npa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UCRNP2_9222
MMR (mismatch excision repair)
Other MMR factors
UCRNP2_9222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
ADDB_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
EOD44014
UniProt:
R1GDP2
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MDIQNTSINRNDTLKKKRKRTPANASRSAHGVQLHGLPPKTLESPLATTLSIRTRSARRN
AANNLPGASPAKSSGNSEPGKPSPKPRRVRFMDNMFGGMKKVDAGTTIRQLMVSTSPHQL
RERLGEPCLPNIFDLARQGKFGAIGTLGRQQDKIIRKMFHRMARDTRDGMDTDANAEYFL
QIIEEMPADGLEVPFLAGEMFKLLVVLVSYRKPPPPAAKDESAQWVMTRQQILSILAKEF
RDAIRADESIGFEEGSEGAGFVYDTHEWFIGKVLAPPGSGKTKTLTARVAYLTSHCGFKP
WNIIVCTFTIKAAREMKERIRGLVGDGVEAKLILGTFHSVARRFLCFYGQHIGIEKNFGI
ADTSDTTAIIKRIIKRRGYGVEPSAARSRISGLKARSIGCDEYAATQKPAEQQEFAAIYS
EYEETLKGSNLLDYDDLLLRCVDLLRKRPECVSNIQAVLIDEFQDTNHVQYELMRLMAQY
RKNITIVGDPDQSIYGFRSAEIKNLKTMQKDYPDTLVSILQENYRSGGAILQSAQQVIEQ
DESRPAKALFATHCPGEVPVLRRLPSAAIEASWIVTEIQRSQALTGKLLNHSDFAILLRS
AALSRHIESALGKAGIPYRMSA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaaaacacctccatcaatcgcaacgacacactcaagaaaaagaggaagcgt
actccggccaacgcatcgaggagcgcccatggcgtgcagctccacggcttacccccgaag
actctagaatcgcctttagctaccacattgtccatccgcacacgatcagcccgccgcaat
gccgcgaacaatcttcctggcgcatccccagccaaatcttccggtaacagtgaacctgga
aagccctctccgaagccaaggcgtgtgaggttcatggacaacatgttcggcggcatgaag
aaagtcgacgccggtacgacgatccgccagctcatggtcagcacatctccccaccagctc
cgcgagcgcttgggcgagccttgcctacccaatatcttcgatctggctcgccagggtaaa
ttcggtgcgatcggcaccctcggtcggcagcaggacaagatcatccgcaagatgttccac
aggatggccagggatactcgtgatggcatggacacggacgcgaatgcggagtacttcctg
cagatcatagaggagatgccggccgacggtctggaggttccgttcctggctggcgagatg
ttcaagctcctcgtcgtccttgtcagctaccggaagccaccgccgccggcagcaaaagat
gagtcggcgcagtgggtcatgacaaggcagcagatcttaagcattttggccaaggagttt
cgcgatgccattcgcgcggatgagagcatcggtttcgaagagggctcggagggcgctggc
ttcgtttacgatacacatgagtggttcatcgggaaggtcctcgcgccacctggatccggg
aagacaaaaaccctaactgcgcgcgtcgcctacctcacctcgcattgcggcttcaagcct
tggaacatcatcgtgtgtaccttcaccatcaaggctgcgcgagagatgaaggagcgcatc
cgcggtctcgtcggagatggcgtggaggcgaagttgatcctcggcacgttccactcggtc
gctcgccgtttcctctgcttctacggacagcacatcggcattgagaagaactttggcatt
gccgatacctccgacacaactgccatcatcaagcgcatcatcaagcgtcgtggctatggc
gtcgagccgtctgccgccaggtcacgaatctccgggctgaaggctcgaagcatcggttgc
gacgagtatgccgcaacccaaaaaccagcagagcagcaggagttcgcggctatctactct
gagtatgaagaaaccttgaaaggatccaacctcctggactacgatgacctactcctgcga
tgcgtcgaccttttgcgaaagcgcccggaatgcgtctccaatatccaggcggttctcatc
gacgaattccaggacacgaaccacgttcagtatgagctcatgcgccttatggcccagtac
cggaagaacattaccatcgttggtgacccggaccagagtatctatggtttccggtcggcg
gaaatcaagaatctcaagaccatgcagaaagactatccagataccctcgtctccatcctg
caggagaactacaggtccggaggcgcaatcttgcaatcggcccagcaggtcatcgagcaa
gacgagagccgtcccgccaaagcactgttcgcgactcattgccctggagaagtaccagtg
ttgcggcgcttaccctccgccgcgatcgaagcatcttggatcgtcaccgaaatccaacgc
tctcaggcattgactggaaagcttctgaaccactccgactttgcgattctgctccgttct
gccgctttgtcacgccatattgaatcagccctcggaaaggctgggattccgtaccgcatg
tccgcataa
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integrated database retrieval system
