Neofusicoccum parvum: UCRNP2_9371
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Entry
UCRNP2_9371 CDS
T03126
Name
(GenBank) putative rhamnogalacturonate lyase protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
UCRNP2_9371
Enzymes [BR:
npa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
UCRNP2_9371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
EOD43922
UniProt:
R1E934
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MTVKGFGLGLLFSQLCAAAGPFLQSLEDGSWVIGNDLWNITQGSVYGKQLYYKDKDLIGD
AVGHYVGYNGENNLNFTSAEIVAQGDNYIDISFNAAQGEFHWVIFDDLTGAYQYFVNRDL
PVLGVFRTLFRLDNQTFPNGRTNIKDEPLPAFAEFLNATNVQDETWERADGTFLTKYDWS
AFIRDIDYYGVYGDDYGSWYIRPGTDYFNGNHLKQELIVHRESKTGDAVQLNVVHGTHFQ
ASSSDAFPDGKIFGPWLWYLNDGSRDDAAARQKQEFAAWPYAWLDDAAYQARASEVTGTL
RLSDGRPAAGAAVFLGENRSNKTTLDQGALYNYATHADAQGGFRFADVRAATYGLYAWAD
GGEVLGNVTTSFVQDDVEIAAGATVALPALDEWAVPAGRETIFRIGDVDRKALGFALGGH
AYQHGLVDQAPANLTFTVGASRDADWYFAQSALGSWDVVFDVDAAASARNRSALLSVALA
GFSRGSSASIYLNGAAARVGNITTDAVPTDPSLYRSATVAGEWHLFEFPVDGALLVDGSN
TLSVVVERSTRWRGWLWDSLILEWV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaaaggctttggactcggcctgctgttctcgcagctctgcgctgccgccggc
ccgttcctccaatcgctggaggacggcagctgggtcattggcaacgatctctggaacatc
actcagggttccgtgtacggcaagcagctgtactacaaggacaaggatcttattggcgat
gctgttggacactatgtcggatacaacggcgagaacaacctgaacttcacctccgccgag
atcgtcgcccagggcgacaactacatcgacatcagcttcaacgcggcccagggagaattc
cactgggtcattttcgacgacctgaccggcgcgtaccagtacttcgtgaaccgcgacctg
cccgtgctcggcgtgttccgcacgctcttccgcctcgacaaccagaccttccccaacggc
cgcaccaacatcaaggacgagccgctcccggccttcgccgagtttctcaacgccaccaac
gtgcaggacgagacgtgggagcgcgccgacggcaccttcctcaccaagtacgactggagc
gccttcatccgcgacatcgactactacggcgtctacggcgacgactacggcagctggtat
atccgccccggaaccgactacttcaacggaaaccacctgaagcaggagctgatcgtccac
cgcgagtcgaagacgggagacgccgtgcagctgaacgtggtgcacggcacgcacttccag
gcctcgtcgtccgacgccttcccggacggcaagatcttcgggccctggctgtggtacctc
aacgacggctcgagggacgacgcggcggcgcggcagaaacaagagttcgcagcgtggccg
tacgcctggctagacgacgcggcgtaccaggcgcgggcgagcgaggtaaccggcacgcta
cgtctgtctgacgggcggccagcggcgggcgcggccgtgttcctgggcgagaaccggtcg
aacaagacgactctggaccagggggcgctgtacaactacgcgacgcacgcggacgcgcag
ggcggcttccggttcgcggacgtgcgggccgcgacgtacgggctgtacgcgtgggcggac
ggcggcgaggtgctcggcaacgtgacgaccagcttcgtgcaggacgacgtcgagatcgcg
gccggggccaccgtcgcgctgcccgcgctcgacgagtgggcggtgccggcggggcgcgag
accatcttccgcatcggcgacgtcgaccgcaaggcgctgggcttcgcgctgggcgggcac
gcgtaccagcacggcctggtcgaccaggcgcccgccaacctgaccttcaccgtcggcgcc
agccgcgacgccgactggtacttcgcgcagtcggcgctcggcagctgggacgtcgtgttc
gacgtcgacgccgcggcgagcgcccgcaaccgctccgcgctgctgtccgtcgcgctggcc
ggcttctcgcgcggctccagcgcgagcatctacctcaacggcgccgccgccagggtcggc
aacatcacgaccgacgccgtgcccaccgacccgtcgctgtaccggtcggccaccgtggcc
ggcgagtggcacctgttcgagttccccgtcgacggcgcgctgctggtcgacggatccaac
acgctgagcgtcgtcgtcgagcggtcgacgcgctggaggggctggctgtgggacagcctc
atcctggagtgggtgtga
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