Neofusicoccum parvum: UCRNP2_9492
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Entry
UCRNP2_9492 CDS
T03126
Name
(GenBank) putative pre-mrna polyadenylation factor fip1 protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
npa
Neofusicoccum parvum
Pathway
npa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UCRNP2_9492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_9492
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
UCRNP2_9492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TFIIF_alpha
Motif
Other DBs
NCBI-ProteinID:
EOD43807
UniProt:
R1E8P9
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MEEDDDFYGDDSAPAVKKDEPATGDEDVKDEKMDDSLEEGEEEEEDDSDSDIEIITESKD
APAPEPSSQRGAAFNSSFKSDTSRAAPADAAKGQQPQPAGAKAGSTAPSAPQKPGSAYPE
VRTSNIDVNATPIYDPVGKPITALDIDADLAEHDKPWRLPGADQSDYFNYGFDEFTWTTY
CLRQQNMTSTLKDQKAETAKFEMMLNGGMPMMPGMPPAGPAAAPPVPGAPTGPAAQTQQA
GQQAQNGGMPGGMPGMPGLDENMMQQMAQHMMASGMDPSQMSFETFMQSMQGMGGMQGGP
PSGPAAQQAQQGGGFGGQGGPQGQYGGYGGGGQGGFRGGRGGRRW
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgacgatttctacggcgacgacagcgccccagccgtcaagaaggacgag
cccgccactggcgacgaggacgtgaaggacgagaagatggatgactcgctcgaggagggc
gaggaagaagaagaggacgatagcgactcggacatcgagatcattacagagagcaaggac
gcgccagcacctgagccatcctctcaacgcggcgccgccttcaactcgtccttcaagtcc
gacacctcgcgcgccgcacccgccgatgcagcaaagggacagcagccacaacccgcaggc
gccaaagcaggctcaacagctccgtcagcgccgcagaagcctggctccgcgtaccctgaa
gtccgcacctccaacattgacgtcaacgccacacccatctacgatcccgtgggcaagccc
atcacggcgctggatatcgacgctgaccttgccgagcacgacaagccctggcgcctcccc
ggcgctgaccagtctgactacttcaactacggcttcgacgagttcacctggacaacgtac
tgcctgcgccagcagaacatgaccagcaccctaaaggaccagaaggccgagacggcaaag
ttcgagatgatgctcaacggcggcatgcccatgatgcctggcatgcctcccgcgggcccc
gccgccgccccacccgtcccaggcgctcccaccggtcctgcggcccagacacagcaagct
ggccagcaagcacaaaacgggggaatgccgggtggtatgcctggcatgcctggcctggac
gagaacatgatgcagcaaatggcccagcacatgatggcgtctggcatggatccctcacag
atgagcttcgagaccttcatgcagagcatgcagggaatgggcggcatgcagggcggcccg
ccttccggtccggcagcacagcaggcccagcaaggtggtgggtttggcggacaaggcggt
ccgcagggccaatacggcggctatggaggtggcggccagggcggattcagaggaggaagg
ggaggaaggagatggtga
DBGET
integrated database retrieval system
