Neofusicoccum parvum: UCRNP2_9834
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Entry
UCRNP2_9834 CDS
T03126
Name
(GenBank) putative swi-snf complex subunit protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
npa
Neofusicoccum parvum
Pathway
npa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UCRNP2_9834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_9834
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_9834
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
UCRNP2_9834
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
UCRNP2_9834
PBAF complex
UCRNP2_9834
GBAF(ncBAF) complex
UCRNP2_9834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-ProteinID:
EOD43504
UniProt:
R1GCC7
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MIKFADLSATMRAAGPMVSAAHPPPITPQQLQAQQQAEMQKRELAKRQSRKPTDKNIPDG
IEDLVVGDGVQRYRQLRDAERKLDAVMMRKRLDINESSARNFTRYRTMRVWISNTAENQP
WQNTSMDPDAFDFGSESQATYRVKIEGRLLDDDEDAEADKEPAEEQKDGDAMEQDGSDAA
KKAKAGKPASNQRTKLSHFFKQITINFDRSQSLQPDGYTSIEWKKPENSANTNDAAANFD
TLEFERKSDENINVTVNLFRDEVPERFKLSPPLAELLGTEEDDRGGILMGIWIYVKANNL
QEDEDSRKIRCDAQLKPLFDNRDFVPFPSIPQLIIPHLSPLPPYQLPYTIRVDKSYITPD
DGTAASQPTIYNVLVPLDDPLRIAMSRITTNPQMLNQIASLDESLALAVQAIQHSKAKHA
FYTAMSTDPVVFVKRWISSQQRDLEVILGEATRGGGEDVASEEFRRGGQEGVWGGDRALE
SVGLWLAKAGKAH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatttgctgacctgagcgccacgatgcgcgccgcaggccccatggtgtcggcc
gcgcacccgccgcccatcacgccgcagcagctgcaggcccagcagcaggctgagatgcag
aagcgcgagctggccaagcgccagtcgcgcaagcccaccgataagaacatccccgacggc
attgaggacctagtcgtcggcgatggcgtccagcgctaccgccagctgcgcgacgccgag
cgcaaactcgacgccgtcatgatgcgcaagcgcctcgacatcaacgagagcagcgcccgc
aacttcacccgctaccgcaccatgcgcgtttggatcagcaacaccgccgagaaccagccc
tggcagaacacaagcatggacccggacgccttcgactttggcagcgagagtcaggccacc
taccgcgtgaagattgaggggcgtctgctcgacgacgatgaggatgccgaggcagacaag
gagccggctgaggagcagaaggatggcgatgcaatggagcaggacggaagcgatgctgcg
aagaaggccaaggcagggaagcctgcaagcaaccaacgcaccaagctgtcgcatttcttc
aagcagatcaccatcaacttcgaccgctcgcaatccctccaacctgacggctatacctcg
attgagtggaagaagcccgagaattccgccaacaccaacgatgcggccgcaaactttgac
acgctggagtttgagcgcaagagcgacgagaacatcaacgtcactgtcaacctcttccgt
gacgaggttcccgagcgtttcaagcttagcccacccctagctgagttgttgggtactgag
gaggatgaccgtggcggcattctgatgggcatctggatctacgtcaaggccaacaatctg
caagaagatgaggatagccggaaaatccggtgtgacgctcaattgaagccgctcttcgat
aaccgggatttcgtacccttcccgtcgatcccccagttgatcattccccacctctccccg
ctccccccctaccaactcccttacacgattcgtgtcgacaagtcctacattactccagac
gacggcacggccgcctcccaaccgacaatctacaacgtcctcgtcccgcttgacgaccct
ctccgtattgccatgtcccgcatcacgacgaacccgcaaatgctgaaccagatcgcgtca
ctggatgaatctctggccctcgccgtccaggcaattcagcactctaaggccaagcacgcc
ttctacaccgccatgagcaccgatcctgtcgtctttgtcaagcgctggatcagctctcag
cagcgcgacctcgaggtcattctcggcgaggcaacgcgtggcggtggcgaggatgtcgcc
agcgaggagttcaggcgaggcggccaggagggtgtctggggcggcgaccgcgctctggag
agcgttgggctgtggctggcgaaggccggaaaggcgcattaa
DBGET
integrated database retrieval system
