Neofusicoccum parvum: UCRNP2_99
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Entry
UCRNP2_99 CDS
T03126
Name
(GenBank) putative pre-mrna splicing factor protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
npa
Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_99
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_99
Spliceosome [BR:
npa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
UCRNP2_99
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
UCRNP2_99
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
HAT_PRP39_C
Nup35_RRM_2
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-ProteinID:
EOD53098
UniProt:
R1EZB0
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MNIANLLSPQDSPTKEESQTPPLRSPQPSQSPIQRPGRPQKSRKSSGLSQVQQYSPPPQQ
PPPQYHQQHHQQPPPQQLAHHHHGQPPAHQHQPPPQQQLQLPQIPTPNAAHSYRQYGSVQ
HAPSPGPQPAQNGRSMLSATSTPTGDIRSPLQHMPEARTPPAHARPQQPPMHRHGSTPGM
DTLADLASMQHHQQATRQSSQGLRSPQVFQRAPSVGYNVHSLTRTISSSSAKDIAMQEQP
RVLQSASLSAEENKAISDLVTALGENSYDYTSHIKLVELLTKGLRDHVTPPDQPDASRDP
YSYELLAELRRARQTMQSKFAIGEDSWIAWINDEKMLARSTDDRLNLMELCLKSIQEEPS
SSTLWRLYGDYMHWLWAAAFDVEPSDWTEEDKIVGREAFSWQAMKDVWDQGLPATQWHMN
DSHLVWDRWMEIMLRDQEARPEPQKLHHLRNAFTERLLKPHATWENTFQMFSSFTSRYFN
AEYEETMLSMTKRASQAKQQFALREQYELKVDRAVKAGDKDAEWEAYSQYLEWEVRNKGV
FSFHLINALYERATLRFSIYATVWQDYVQVLMEHPNSGVEVLPVLERGSRHCPWSGELWS
HRLLTLEAEGRSFDEMESVKHSATETGLLDVGGLEELLKVYIAWCGFLRRKAFHARSTED
DIDIAEVGIRSALEHVKEIGEKTYGKEFKGDPQYRLERINIKFITQSGNVQSARDCWKAL
IPRQENSYDFWYRYYIWEMVTWSKWAMRDKENSGQSLESPREATEILRQGLKKVTTMDWP
EPLIDMFINHCEQHETVHEYRYAIIEAKKAREEVTIRRQKEAAEAAAIYQQQTAGAADAT
QVAYEDPAANGKRKRDLDAASEENATKKSRQAEAAGVEPMEVEQSSSAAAQLKRDREHTT
IIVKHIPSTTPQIKIRQFFTSCGKINSINLVPDGNGSTQSATVEFETPEEAQFALSRDGK
KIDGGSIQISQGTGSTLWVTNYPPEADETYIRELFKDNGEVVSVRFPSLKYNTHRRFCYV
TLGSAEEAEAASKALNGKSLGKNFTLKALVSDPTHKDNRQGPMYEGREVFVGNIENSATD
QEIQDFISPLEGFVNVRIPRNMAGKSKGVAFVEFDTAENAKKGVESLDKKDFKQRTLRVD
IAEPKGSKRHATAVIGQPSASPEPGSTPGAADTNGVQSGANDRRERTIALMNIPDTVNDA
RIRAIVEPHGALRKIVLMPEHQGAVVEFAHVSDVGKASLALDGQEITTGRNIRIGTVEEM
KKMRGEKKVDRLGAAGPAGKKKDGKKEEPSKAPALMQPAPRISRPGQQGARRGGKGGLGT
KRAGGPSSAGASKDVEMGGTGAEASIGKSNADFKAIFLASRDKGKDEGDGEKKDGCDGGE
GSSAA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgcaaatctcctcagtccgcaggactcgccgaccaaagaggaatcccagacg
ccgccgctgcgcagcccccagccgtcgcagtcgcccatccagcgccctggccgcccgcag
aagtcgcggaagtcgtctggcctcagccaggtgcagcagtactcgccgccgccgcagcag
cccccgccgcagtaccaccagcaacaccaccagcagcccccgccgcagcagctcgcccac
caccaccacggccagccgcccgcccaccagcaccagccgcccccgcagcagcagctccag
ctgccgcagattcccaccccgaatgccgcccactcgtaccggcagtacggcagcgtgcag
cacgcgccgtcgccggggccccagccggcgcagaacgggcggagcatgttgagcgcgacg
agcaccccgacgggcgacatcaggagtccgcttcagcacatgcctgaggcccgcaccccg
cccgcccacgcgcgcccgcagcagccgcccatgcaccgccacggctcgacacccggcatg
gacacgctggcagatctcgcgtccatgcagcatcaccagcaggccacccgccagagcagc
cagggcctcaggtcgccgcaggttttccagcgcgcgccgtccgtgggctacaacgtccac
agcctcacccgcaccatatcctccagctccgcaaaggacatcgccatgcaggagcagccg
cgcgtgctccagtccgcctcgctctccgccgaggaaaacaaggcgatcagcgacctggtc
accgccctcggcgagaactcgtacgactacacgtcgcacatcaagctcgtcgagctcctc
accaagggtctgcgcgaccacgtcaccccgcccgaccaacccgatgcctcccgcgaccct
tactcatacgagctgctcgccgagctccgccgcgcgcgccagacgatgcagtcgaagttt
gcgattggcgaggacagctggatcgcctggataaacgacgagaagatgctagcgcgctcc
acagacgaccgtctgaacttgatggagctgtgcctgaagtcgatccaggaggagcccagc
agttccactctgtggcgcctgtatggcgactacatgcactggctgtgggccgccgccttc
gacgtggagccgtcggactggaccgaggaagacaagattgtgggacgggaggccttctcg
tggcaggctatgaaggacgtctgggaccagggtctgcccgccacccagtggcacatgaac
gacagccacctcgtgtgggaccgctggatggagattatgctgcgagaccaggaggctcgt
ccggaaccccagaagctccaccacctcaggaacgccttcaccgagcgcctgctgaaaccc
catgcgacctgggagaacactttccagatgttctccagcttcacatcccgatacttcaac
gccgagtacgaagagacgatgctgagcatgacgaagcgcgccagccaggccaaacagcag
tttgcattgcgtgagcagtatgagctgaaggttgacagggccgtcaaagccggagacaag
gacgccgagtgggaggcttactcacagtatctagaatgggaggtgcgcaacaagggtgtt
ttcagcttccacctcatcaatgccttgtacgagcgtgccaccctccgcttctccatttat
gctaccgtgtggcaagattatgtccaggtgctgatggaacaccctaactctggagtcgag
gtccttcccgtgcttgagagaggcagccgccactgtccctggtctggagagctctggtcg
caccgcttactcaccctcgaagcagaaggcaggtctttcgacgagatggagagcgttaag
cacagtgctactgagaccggtttgttggatgtcggtggtctggaagagctgctgaaggtc
tacattgcctggtgcggttttctgcgccgcaaggcttttcatgctcgctccactgaggat
gatattgacatcgccgaggtcggcattcgctccgctctggaacacgtcaaagagatcgga
gagaagacgtacggaaaggagttcaagggcgacccgcagtaccgtctggagaggatcaac
atcaagttcatcacccaaagcggcaacgtacagtcggctcgtgattgctggaaagccctc
atcccccggcaagagaacagctacgacttttggtaccgctactacatctgggagatggtc
acctggtcgaagtgggccatgcgggacaaggagaattccggacagagcctagagtcaccc
cgagaagccactgaaatcctacgccagggcctgaagaaggtaacgacgatggactggcct
gagccactcattgacatgttcatcaaccactgtgagcagcatgagacggtccacgagtac
aggtatgccataattgaggcaaaaaaggccagggaggaagttacgatcagacgccagaaa
gaggccgctgaagctgcagctatttaccaacagcagacggccggcgccgcagatgcaaca
caggtagcctacgaggatcccgcggccaatggcaagcgtaagcgggacttggatgctgct
tctgaggagaacgcaacaaaaaagagcaggcaagcggaggcagcaggcgtggagcccatg
gaggtcgagcaatcatcttcggctgcggcacagctcaagcgcgaccgagagcacacgacc
atcatcgtcaagcacatcccatccacaacccctcaaataaagatccgccagttcttcact
tcctgcggcaagatcaacagtatcaacctcgtccctgacgggaacggatctacacaatca
gcaactgttgaatttgagacaccagaagaagctcaattcgcattatcacgcgatggcaag
aagatcgatggtggcagcatccagatctcgcagggcactggcagcactctgtgggtcaca
aattacccaccggaggctgatgaaacatacatccgtgagcttttcaaggacaatggcgag
gtcgtctcggtgcggttcccatcgctcaagtacaacacccatcgacgcttctgctatgtg
accctgggcagtgccgaggaggctgaagctgcgtcgaaggctcttaatggcaaatcacta
ggaaagaacttcacactcaaggctctcgtctcggatcccacccacaaagataatcgtcag
gggcctatgtacgagggtcgggaagtttttgttggaaacatcgagaacagcgcgacggac
caggagatccaggatttcatatcacccctggagggctttgtgaacgtacgcatcccgagg
aacatggctggcaagagcaagggtgttgcctttgttgagtttgacacggcagagaatgca
aagaagggtgtggagagcctcgacaagaaagacttcaagcaacgcaccctccgtgtcgac
atcgccgaaccaaagggcagcaagcgtcacgctaccgcagtcatcggccagccttccgct
tccccagaacctggctctacccctggagctgccgacacaaatggcgtgcaatcaggtgcc
aacgaccgccgcgagcgtacgattgctctgatgaacattccggacaccgtcaatgacgca
cgcatccgagcaattgttgaacctcacggtgcgctgagaaagatcgtcctcatgcccgag
catcagggtgctgtcgttgagttcgcccacgtgtctgatgtcggcaaagccagcttggct
ctcgatggtcaggaaatcacaaccggcaggaacatccgcattggcactgtagaggagatg
aagaagatgcgcggggagaagaaggtcgatcgtctgggtgctgctggtcctgcgggaaaa
aagaaggatggcaaaaaggaggagcccagcaaggctcctgcactgatgcagccagcaccg
cgaataagtcgaccgggccagcagggtgctaggagaggcggaaagggcggtttgggcacg
aaaagggctggtggtccttcgtcggcaggcgcgagcaaggatgttgagatgggtggtacg
ggtgcggaggcttcgatcggcaagagtaacgcggactttaaggccattttccttgcgtcg
agagacaagggaaaggatgagggtgatggcgagaagaaggacggttgtgacgggggcgaa
ggcagttccgcggcgtga
DBGET
integrated database retrieval system
