KEGG   Nocardioides panacisoli: KUV85_00385
Entry
KUV85_00385       CDS       T08184                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
npc  Nocardioides panacisoli
Brite
KEGG Orthology (KO) [BR:npc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npc03400]
    KUV85_00385
Enzymes [BR:npc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KUV85_00385
DNA repair and recombination proteins [BR:npc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KUV85_00385
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12
Other DBs
NCBI-ProteinID: QYJ04172
LinkDB
Position
62956..65901
AA seq 981 aa
MDDAAADQDVNKRVLMAVIHIIEAWMERDRGALARINGGASRPDSVLGEKSKRAYSVLKQ
YLPSHAHANLVAGIAGIAPRATAGVGETARRWARPEDRVRVARALLASAARAQSAAEERE
ERARIAAELEAARLAAEAERLAAEEARRAAEAESEARRRAERARVLARYRGEADAELRRD
FLGADAWFDSWDTGGHVARSDFEDWKAAFVQNWAREVLHDDKFDIQQARAVSTTSHDLRL
VARAGSGKTRTIVTRALFLQLHCRVDPGGILLVAFNRKAVEEISKRLGEALPKGARLPHV
VTFHALAYALLRPEEELVFDDSESLAQSRKVQAVVNDLIVERKDDVRRAMLGHFTDDWKR
IQQRGLHMSREEFFASRAEVTRVTLGGEYVKSFGERLIANTLFEHGVEYKYERNFTRGGF
NYRPDFTVLVNWKPRVVIEYFGITDDPQYQRNADTKREFWAQQSDVVFLEYDPSQIVSLG
EEGFRDQVLAALDHAEIPHRSLSEDEIWERVRQRAIDTFSKTLRGFVNRARQHNLSPDDI
RQRMYALQDPGDGVVAFLELAGDVLEEYLNRARRDGFEDFSGVMWRAAAEVRRGRATWTR
AGGKEHGDLRDLRFIHVDEFQDFSEMFMDFVQAIRVQAPGSSLCCVGDDWQAINGFAGAD
LRFFENFETDFPKAVTHQLVTNYRSGGRIVSAGNAVMDGFGEPARSFQSRSGSIHIARLT
DFEPSPTERHVFQGDVGTPALLRLIKSGLNETEGTVAVLFRRNTVPWFTNTGQGAFVRKL
DGYLTHLRGHFSEDDGKRLEVTTSHKYKGRESDFVIVADADKKSYPLIHPTVELFEVFGD
TVDSLTDADRRLFYVATTRAESSLCYLVSSEDPSSFLGAVMAMARPVDWRALPIAVSDAD
AQVEVRVYDGFEVRQRLKDEFGFQFDESTKVWYVFRPADGFDFRHIQQVLSFVGPRLIEV
RDETQRVIHRAGARLERGRPM
NT seq 2946 nt   +upstreamnt  +downstreamnt
gtggatgacgcggccgctgaccaggacgtcaacaagcgcgtcttgatggcggtcatccac
atcatcgaggcctggatggagcgcgatcgcggagcattggcgcgtatcaacgggggcgcg
tccaggccagattcggtgctgggggagaagagcaaacgcgcctactccgtgctcaagcag
tacctaccgtcacatgcacacgcgaaccttgtggcagggatagcagggatcgctccccgt
gccacagcaggcgtcggcgagacggcgcgccgttgggctcgaccggaagatcgggtacgg
gtggcgcgtgcgctgctggcgtcggccgcaagggcgcagagcgcggccgaggaacgcgag
gaacgggcacggatagcggccgagctcgaggcagcgcggctggctgccgaggccgagcgg
ctggcggctgaagaggcgcgccgcgcggctgaggccgagtcggaagcccgacggcgagcc
gaacgggctcgggtgcttgctcgctaccgcggcgaagcggacgctgagctgcggcgagac
ttcctcggggctgatgcctggttcgactcgtgggacacaggagggcacgtcgcgcggagc
gacttcgaggactggaaggccgcgttcgttcagaactgggctcgcgaagtcctccacgat
gacaagttcgacatccaacaggcccgagccgtctcgacaacttcacacgatctacggctc
gttgcccgggcaggtagtgggaagacccgcaccattgtcactcgggccttgttcctccag
ctgcactgccgggtcgatcccggcgggatcctgttggttgccttcaatcgcaaagcagtc
gaggagatcagcaagcgcctaggggaggcgctcccgaagggtgctcgcctgccgcacgtc
gtcaccttccatgcgctcgcgtacgcgctgctacggccagaggaggaacttgtcttcgat
gactccgaatcgctcgcccagtcgaggaaggtccaagccgtcgtgaacgacctgatcgtc
gagcggaaggacgacgtgcggcgggccatgctcggtcacttcaccgacgactggaagcgg
atccagcagcgcggattgcacatgagtcgcgaggagttcttcgccagccgggccgaggta
acgcgagtgacgctcggtggcgagtacgtgaagtcattcggcgagagactgattgcgaac
acgttgttcgagcacggtgtcgagtacaaatacgagcgcaacttcacccggggaggcttc
aactaccgacccgacttcacggtgctggtcaactggaagccccgcgttgtcatcgagtac
ttcggaatcaccgacgacccccagtaccagcgcaacgccgacacgaagcgcgagttctgg
gcgcagcagagcgacgtggtgttcctcgagtacgatccgtcgcagatcgtttcgctcggc
gaggagggattccgcgatcaggtgctcgcggctctggaccatgccgagatcccgcatcgc
tcgcttagtgaggacgagatctgggagcgggttcgccagagagctatcgacaccttcagc
aagaccttgcgtgggttcgtcaatcgggcccggcagcacaacctcagccctgacgacatc
cggcagcgcatgtatgcgctacaagatcccggcgacggggtggttgcgttcctggagttg
gcaggcgacgtgctcgaggaatacctcaaccgagctcggcgtgacggcttcgaggacttc
agtggcgtcatgtggcgggccgccgcagaggtacgccgagggcgcgccacctggacccgg
gcaggcgggaaggagcacggcgaccttcgcgatcttcgattcatccacgtcgacgagttc
caagacttctccgagatgtttatggacttcgttcaggcgatccgcgtacaggcacctggg
tcctcgctctgctgcgtcggtgatgactggcaggccatcaatgggttcgccggagctgac
ctgcggttcttcgagaacttcgagactgacttcccgaaagcggtgacccaccaactggtc
accaactaccgctccggtggtcggattgtgtcggcgggcaacgcggttatggatggcttc
ggcgaacctgcccgctcgttccaatcgcgatccggcagcatccacatcgcccggctgacc
gacttcgagccctcgcccaccgagcgccatgtcttccagggtgacgtcggcacacctgca
ctcctccgcttgatcaagagtggcctcaacgagacggagggcaccgtcgcagtcctgttc
agacgaaataccgttccctggttcaccaacactggccaaggtgccttcgtgcggaagctg
gacggctacctcacccatctccgagggcacttctcggaggacgatggcaagcggctcgag
gtcacgacatcccacaagtacaaggggcgggagtcggacttcgtgatcgtcgccgacgcc
gacaagaagtcatacccgctgatccacccgacggtggagcttttcgaggtcttcggtgac
accgtcgacagccttaccgatgctgaccgcaggctgttctacgtcgcaacgacgcgcgcc
gagtcctcgctctgctacctcgtcagttccgaggacccctcaagcttcctcggcgcggtt
atggccatggcgcggcccgtggactggcgagcgttgccgattgccgtcagtgacgccgac
gcccaggtcgaggtgcgcgtctacgacggcttcgaggtacgtcagcggctaaaggacgag
ttcggcttccagttcgatgagtcgacgaaagtctggtacgtcttccgtccggcggatgga
ttcgacttccgccacatccaacaagtcctgtcgttcgttgggccacgtctgatcgaggtc
cgcgacgagacccagcgtgtgatccatcgtgccggggctcggctcgagcgcggccgcccg
atgtag

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