Nocardioides panacisoli: KUV85_03225
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Entry
KUV85_03225 CDS
T08184
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
npc
Nocardioides panacisoli
Pathway
npc03030
DNA replication
npc03430
Mismatch repair
npc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUV85_03225
03430 Mismatch repair
KUV85_03225
03440 Homologous recombination
KUV85_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npc03032
]
KUV85_03225
03400 DNA repair and recombination proteins [BR:
npc03400
]
KUV85_03225
Enzymes [BR:
npc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUV85_03225
DNA replication proteins [BR:
npc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUV85_03225
DNA repair and recombination proteins [BR:
npc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUV85_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
XdhC_C
DEDDh_C
Leg1
DUF7508
TMV_coat
Motif
Other DBs
NCBI-ProteinID:
QYJ04708
LinkDB
All DBs
Position
complement(645925..647649)
Genome browser
AA seq
574 aa
AA seq
DB search
MTTTPVRSRWEDQRSFDELGRPLRDITFCVVDLETTGGSAADGDAITEIGAVKVRGGEVL
GEFQTLVNPHTEIPAFIAVLTGITNTMVADAPPIGAALPSFLEFAAGSVLVAHNAPFDVG
FLRRTAQDLDIDWPAFEVVDTVKVARRVVPRSETPNHKLSSLARIFRAGTTPNHRALEDA
RATVDVLHGLMERLGGLGVHTLEELQTYSTKVAAAQRRKRHLADRLPHAPGVYLFRDEQA
HVLYVGTSRDLRKRVRSYFTASETRSRIGEMVQIAAEVTGIECATTLEAQVRELRLIAEH
KPAYNRRSKFPEKTTFIKLTREPWPRLSLVRRVLDDEADYLGPFGSRRAAQSCLDALHET
FPIRQCSGRLAKSPSRSACVLAELGRCLSPCDGGVDDLTYAAMVRQLRDALLRHPDDVVD
LVNAKMAALADQERFEEAGVHRDRLAAFVRAAARTQRLSSLTACPEVVAARREEVTSATG
QQARWVVHVVRHGRLAAAGVIPAGMDAHEFVDQLRASAETVLPAIGPVPAATAEESERIL
RWLEAPGIRLVDVVGEWTCPVAGAGRELDRFSAV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacccccgtgcgctcccgatgggaggaccaacgctccttcgacgagctcggg
aggccgctgcgcgacatcaccttctgcgtggtcgacctcgagaccaccgggggttcggcg
gccgacggcgacgcgatcaccgagatcggggcggtgaaggtgcgcggcggcgaggtcctc
ggcgagttccagacgctggtcaatccccacaccgagatcccggcgttcatcgccgtcctc
accggcatcaccaacaccatggttgccgacgcgccgccgatcggcgcggcactcccctcc
ttcctcgagttcgctgccggctcggtcctcgtggcacacaatgcgccgttcgacgtcggc
ttcctccggcgtaccgcgcaggacctcgacatcgactggccggcgttcgaggtcgtcgac
acggtcaaggtcgcgcgacgggtcgtgccacgcagcgagaccccgaaccacaagctgtcc
tcgctcgcgcggatcttccgtgccggcacgacgccgaaccaccgggcactggaggacgcg
cgagcgacggtcgacgtcctccacgggctgatggagcgcctgggaggactcggcgtccac
acgctcgaggagctccagacctactcgacgaaggtcgcggccgcgcagcgacgcaagcgc
cacctcgccgaccgactcccccacgccccgggggtctacctcttccgcgacgagcaggcg
cacgtgctctacgtcggcacgtcccgtgacctgcgcaagcgggtccgttcctacttcacc
gcctcggagacgcgcagtcggatcggcgagatggtgcagatcgccgcggaggtcaccggc
atcgagtgcgcgacgacgctcgaggcccaggtccgcgagctccggctcatcgccgagcac
aagcccgcctacaaccgccgctcgaagttccccgagaagacaaccttcatcaagctcacc
cgggagccgtggccacgcctgtcgctagtgcgccgggtgctcgacgacgaggccgactac
ctcggaccgttcgggtcgcggcgggcggcgcagtcctgcctggatgcgctgcacgagacg
ttcccgatccgacagtgctcgggacgattggcgaagtcaccgtcacgttcggcgtgcgtg
ctcgccgagctcggccggtgcctctccccctgtgacggcggggtggacgacctgacctac
gccgcgatggtgcggcagctgcgggacgccctgttgcgccaccccgacgacgtggtcgac
ctcgtgaacgccaagatggccgcgctcgcggaccaggagcggttcgaggaagcaggcgtc
caccgtgaccggctggcggcgttcgtccgcgccgccgcgcggacccagcggttgagttcg
ctcaccgcctgtcccgaggtcgtcgcagcgcgccgcgaggaggtgaccagtgccacgggc
cagcaggcccgttgggtggtgcacgtcgtacgccacggtcgactcgccgccgccggagtg
atccccgccggcatggacgcccacgagttcgtggaccagctgcgggccagcgccgagacg
gtcctgcccgcgatcggaccggtgcctgccgcgaccgccgaggagagcgagcggatcctg
cgctggctggaggcgcccggcattcgcctggtcgacgtcgtgggcgagtggacctgtccg
gtcgcgggtgccgggcgcgagctggaccggttcagcgccgtctga
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