Nocardioides panacisoli: KUV85_03465
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Entry
KUV85_03465 CDS
T08184
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
npc
Nocardioides panacisoli
Pathway
npc03030
DNA replication
npc03430
Mismatch repair
npc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUV85_03465 (dnaE)
03430 Mismatch repair
KUV85_03465 (dnaE)
03440 Homologous recombination
KUV85_03465 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npc03032
]
KUV85_03465 (dnaE)
03400 DNA repair and recombination proteins [BR:
npc03400
]
KUV85_03465 (dnaE)
Enzymes [BR:
npc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUV85_03465 (dnaE)
DNA replication proteins [BR:
npc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUV85_03465 (dnaE)
DNA repair and recombination proteins [BR:
npc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUV85_03465 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QYJ04754
LinkDB
All DBs
Position
694700..698272
Genome browser
AA seq
1190 aa
AA seq
DB search
MAAGPSGSTSGDFVHLHVHTEYSMLDGASLLDGLFERVNELDMPAIAMTDHGNLHGAYDF
WSKARKHDVKPIIGIEAYLTPQTHRSERRRVRWGQGDMAEEGGNDVAGGGAYTHMTMWAE
NTPGMHNLFRLSSYASLEGFYYKPRIDRELLHQYADGIIATTGCPSGEIQTRLRLGQYDE
ARKSAGEFQEIFGKDSFFLELMDHDIDIEKRVRNDLLRLGKELGLPPVATNDSHYSQPGD
AEAHDALICVASGKRLADPNRLKFAGGGYYVKSAAEMRETWADRFGMPEACDNTLLIAER
CDVDFTESTGGYMARADVPASEDEESWFVKEVWRGIEERYPGTRLNDRVKERVQMELDVI
RTKGYCGYYLVVADFIGWAKRNGIRVGPGRGSGAGSIAAYALGITDLCPLEHGLIFERFL
NPERPSMPDFDIDFDERRRTEVIQYVSEKYGSDRVAYIATFGRLKAKAAIKDAARVLDHG
FAISDRITKAMPPDVMGKGVPLKDIFDDSHKRFADGAEFRTLHEQDPDVRTIYKTALGLE
GQIRQWGVHAAGVIMSSEPLVDIVPIMKREQDGAIITQFDYPMCESLGLVKMDFLGLRNL
TVLDDAVANIKINRGEDVVVEDLPFDDPATFELLTAGDTLGVFQLDGGPMRALLRSMRPD
KFADISAVGALYRPGPMGADSHNKYARRKNGREAIEPIHPELADALEPVLGETYGLIVYQ
EQVMEIAQVLAGFTLGEADMLRRAMGKKKKEELDRQYVGFQSGMLERGFSQEAITALWEI
LLPFSDYAFNKAHSAAYGVVSYWTAYLKARYPAEYMAALLTSVKDDKDKMAVYLNECRRM
KIAVLPPDVNESQATFTPVGHDIRFGLTAIRNVGRNVVDQVVAAREEQGRFVDFDDFMAK
VPAQVCNKRVVESLIKAGGFDDLKHKRRALVAVHESAVDQYVDIKRNEAIGQDSLFAGLD
DEDGGDFGVQVAIPDIDEWDKTTLLAHERDMLGLYVSDHPLYGLEHVLSNTADCTIGELM
ADEDRPDGSTVTVSGLVTSVQRKITKKGDPWAMVTLEDLEGAVEVLFFPSSYQLANTLLM
PDAIISVRGRLSRSKDQPELHAQEATVPDLDRSEEGPVVISLPATRCTAPVVSQLKQVLS
THPGVTEVRLRLLNRDSTKLMRLDDRLRVSPSSELFAELKQLLGPGCLTG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggtccgagtgggtccacgtccggggacttcgtccacctccacgtccacacc
gagtactccatgctcgacggggcatcgctgctcgacgggctcttcgagcgggtcaacgag
ctggacatgccggcgatcgccatgaccgaccacggcaacctccacggtgcctacgacttc
tggtccaaggcccgcaagcacgacgtgaagccgatcatcggcatcgaggcctacctcacc
ccgcagacccaccgcagcgagcggcgccgcgtgcggtggggccagggcgacatggccgag
gagggcggcaacgacgtcgccggcggtggtgcctacacccacatgacgatgtgggccgag
aacacccccgggatgcacaacctgttccggctctcctcctacgccagcctcgagggcttc
tactacaagccgcgcatcgaccgcgagctgctccaccagtacgccgacggcatcatcgcc
accaccggctgcccctccggcgagatccagacccggctgcgcctgggccagtacgacgag
gcgcgcaagtccgcgggggagttccaggagatcttcggcaaggactccttcttcctcgag
ctgatggaccacgacatcgacatcgagaagcgggtccgcaacgacctgctgcggctcggc
aaggagctcgggctgccgccggtggcgaccaatgactcccactacagccaacccggcgac
gccgaggcgcacgacgcactgatctgcgtcgcatcgggcaagcggctggccgaccccaat
cggctgaagttcgccgggggcggctactacgtgaagtccgcggccgagatgcgtgagacg
tgggccgaccggttcggcatgcccgaggcgtgcgacaacaccctgctcatcgccgagcgg
tgcgacgtcgacttcaccgagtccaccggcggctacatggcccgggcggacgtgccggcg
agcgaggacgaggagtcctggttcgtcaaggaggtctggcgtggcatcgaggagcgctac
cccggcacccggctcaacgaccgggtcaaggaacgcgtgcagatggagctcgacgtcatc
cgcaccaagggctactgcggctactacctggtggtcgccgacttcatcggctgggccaag
cgcaacggcatccgcgtcggccccggtcgtggatcaggcgccggctcgatcgcggcgtac
gccctgggcatcaccgacctctgccccctcgagcacggcctgatcttcgagcggttcctc
aatcccgagcgcccctcgatgcccgacttcgacatcgacttcgacgagcgtcggcgcacc
gaggtcatccagtacgtcagcgagaagtacggcagcgaccgcgtcgcctacatcgcgacg
ttcggccggctcaaggccaaggcggcgatcaaggacgccgcacgggtgctcgaccacggg
ttcgccatctccgaccgcatcaccaaggcgatgccgccggacgtgatgggcaagggcgtg
ccgctgaaggacatattcgacgacagccacaagcgcttcgccgacggtgcggagttccgc
accctgcacgagcaggaccccgacgtccgcacgatctacaagaccgccctcggcctcgag
ggccagatccggcagtggggcgtccacgcggccggcgtgatcatgtccagtgagccgctg
gtcgacatcgtgccgatcatgaagcgcgagcaggacggcgcgatcatcacgcagttcgac
tacccgatgtgcgagtcgctcgggctggtcaagatggacttcctggggctgcgcaacctc
accgtcctcgacgacgcggtcgccaacatcaagatcaaccgcggcgaggacgtcgtcgtg
gaggacctgcccttcgacgaccccgcgaccttcgagctgctcaccgccggcgacacgctg
ggggtcttccagctcgacggcggccccatgcgggcgctgctgcgcagcatgcggccggac
aagttcgccgacatctccgcggtcggtgcgctctaccgtcccggcccgatgggtgcggac
tcgcacaacaagtacgcccgccgcaagaacgggcgcgaggcgatcgagccgatccacccc
gagctggccgacgcgctggagccggtgctgggtgagacctacggcctgatcgtctaccag
gagcaggtgatggagatcgcccaggtcctggccgggttcacgctcggtgaggcggacatg
ctccgtcgcgccatgggcaagaagaagaaggaggagctggaccgccagtacgtcggcttc
cagtccggcatgctcgagcgcgggttctcccaggaggcgatcaccgcgctgtgggagatc
ctcctcccgttctccgactacgccttcaacaaggcccactccgcggcgtacggcgtcgtg
tcctactggaccgcctacctcaaggcgcgctacccggccgagtacatggccgcgctgctg
acctcggtcaaggacgacaaggacaagatggcggtctacctcaacgagtgccgccgcatg
aagatcgcggtcctgccgcccgacgtcaacgagtcccaggcgaccttcaccccggtcggc
cacgacatccgcttcggcctgaccgccatccgcaacgtgggccgcaacgtcgtcgaccag
gtcgtcgccgctcgcgaggagcagggtcggttcgtcgacttcgacgacttcatggccaag
gtgcctgcgcaggtgtgcaacaagcgggtcgtcgagtcgctgatcaaggccggcgggttc
gacgacctcaagcacaagcgccgcgccctcgtggcggtccacgagtccgcggttgaccag
tacgtcgacatcaagcgcaacgaggccatcggccaggactcgctcttcgccggtctggac
gacgaggacggcggcgacttcggggtgcaggtcgcgatccccgacatcgacgagtgggac
aagacgaccctgctcgcccacgagcgcgacatgctcggcctctacgtgtccgaccacccg
ctctacggcctcgagcacgtcctgtccaacaccgcggactgcaccatcggagagctgatg
gccgacgaggaccggcctgacggctccacggtcacggtgagcggactggtgacctcggtg
cagcgcaagatcaccaagaagggggacccgtgggcgatggtcaccctcgaggacctcgag
ggtgccgtcgaggtcctgttcttccccagctcctaccagctggccaacaccctgctgatg
cccgacgcgatcatctcggtgcggggccggctctcgcgcagcaaggaccagcccgagctg
cacgcccaggaggcgacggtccccgacctggaccgctccgaggagggccccgtcgtcatc
agcctgccggccacgcgctgcacggcgccggtggtgtcgcagctcaagcaggtcctctcg
acccaccccggagtgaccgaggtgcggctgcggctgctcaaccgtgactcgaccaagctg
atgcgcctcgacgaccgactgcgggtctcgccgagctcggagctgttcgcggagttgaaa
cagttgctcggtccgggatgcttgacggggtga
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