Nocardioides panacisoli: KUV85_03630
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Entry
KUV85_03630 CDS
T08184
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
npc
Nocardioides panacisoli
Pathway
npc03030
DNA replication
npc03410
Base excision repair
npc03420
Nucleotide excision repair
npc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUV85_03630 (polA)
03410 Base excision repair
KUV85_03630 (polA)
03420 Nucleotide excision repair
KUV85_03630 (polA)
03440 Homologous recombination
KUV85_03630 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npc03032
]
KUV85_03630 (polA)
03400 DNA repair and recombination proteins [BR:
npc03400
]
KUV85_03630 (polA)
Enzymes [BR:
npc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUV85_03630 (polA)
DNA replication proteins [BR:
npc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KUV85_03630 (polA)
DNA repair and recombination proteins [BR:
npc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KUV85_03630 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUV85_03630 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QYJ04784
LinkDB
All DBs
Position
728821..731508
Genome browser
AA seq
895 aa
AA seq
DB search
MPSETSRPRLLLLDGHSLAYRAFFALPVENFSTAAGQHTNAVYGFTSMLVNVLRDEQPTH
VAVAFDVSRQTFRTEEYADYKAKRNKTPDEFRSQLPLIEGVLTGFGIPFLKVDGYEADDI
IATLTTQALAEDMEVLILTGDRDSLQLVTDTSTVLYPMRGVSDLARMTPDAVEEKYGVRP
ERYPELAAIVGETSDNLPGVPGVGQGFAAKWLTTYDGLDNVIAQADQIGGKKGEALRAHL
GDVIRNRRLNALVRDLALERAPGDLAWVDWDRQATLELFDELEFRGELRTRAFDTLGGDE
EPVTEEQVELATTVVRAGEVADFLEGLGHEQVGVHLRGAWAAGTGSVDGIAFATADARAA
YLDLADLGPADDAALAAWLADPEKPKVLHEAKGPELALAAHGWTLAGVAADTALSAYLAQ
PDQRTYHLRDLTLRFLKRELHAEADPDQGELFEDPDTAGGAAQTAMLSAHAVIELAEALA
GEIERAGGARLLTDVELPLVHLLAGMEQVGIAVDGDHLAELEQHFAGEVRAAADAAYEVI
GKEINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALRGLYVQTEHPFLEYLLRHRDV
ARLRQTVEGLLKTVQPDGRIHTTFNQTIAATGRLSSTDPNLQNIPVRTEEGRRIREAFVV
GEGYDCLMTADYSQIEMRIMAHLSEDELLIEAFRNRADFHATTAARVFDVEPDEVTQEMR
AKIKAMNYGLAYGLSAFGLGQQLGIEPGEARGLMEDYFETFGGIRDYLDGVVDEARRDGF
TETIMGRRRYLPDLTSDNRQRRAMAERMALNAPIQGSAADLIKVAMLHVQDAITAAGLSS
RMLLQVHDELVLEVAPGERDALEEIVREQMGRAAELTIPLDVSVGTGATWHEAAH
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtgccctccgagacctcgcgcccccgcctgttgctgctcgacggccactcgctggcctac
cgcgccttcttcgccctgccggtggagaacttctccaccgccgccggccagcacaccaat
gccgtctacggcttcacctcgatgctggtcaacgtgctgcgcgacgagcagcccacccac
gtcgcggtggccttcgacgtctcacgccagaccttccgcaccgaggagtacgccgactac
aaggccaagcgcaacaagacccccgatgagttccgcagccagctgcccctcatcgagggc
gtgctgaccgggttcggcatcccgttcctgaaggtcgacggctacgaggccgacgacatc
atcgccacgctcaccacgcaggccctcgccgaggacatggaggtcctcatcctcaccggc
gaccgcgactcgctgcagctggtcaccgacacctccaccgtgctctacccgatgcgcggc
gtgtccgacctcgcgcggatgacgcccgacgccgtggaggagaagtacggcgtccgcccg
gagcgctaccccgagctcgcggcgatcgtgggggagacctccgacaacctgcccggcgtg
cccggtgtgggccaggggttcgctgccaagtggctcacgacctacgacgggctggacaac
gtcatcgcgcaggccgaccagatcggcggcaagaagggtgaggcgctgcgcgcccacctg
ggcgacgtgatccgcaaccgacgcctcaacgccctggtgcgggacctcgcgctcgagcgc
gcgccgggcgacctcgcgtgggtcgactgggaccggcaggcgaccctggagctcttcgac
gagctggagttccgcggcgagctgcgcacccgtgccttcgacaccctcggtggcgacgag
gagccggtgacggaggagcaggtggagctcgccaccacggtggtgcgtgccggcgaggta
gctgacttcctcgagggcctgggccatgagcaggtcggcgtgcacctgcgcggcgcctgg
gccgcgggcacgggcagcgtcgacggcatcgccttcgccacggccgacgcccgggccgcc
tacctcgacctggcggacctggggccggccgacgacgccgcgctcgctgcctggttggcc
gatcccgagaagcccaaggtgctgcacgaggccaaggggcccgagctggcgctggctgcc
catgggtggacgctcgccggggtcgccgcggacaccgcactgagcgcgtacctcgcgcag
ccggaccagcgcacctaccacctgcgcgacctgaccctgcgcttcctcaagcgggagctg
cacgccgaggccgaccccgaccagggggagctcttcgaggaccccgacacggccggggga
gcagcccagaccgcgatgctctcggcccacgccgtcatcgagctggccgaggcgttggcc
ggcgagatcgagcgcgccggtggcgcgcgcctgctcaccgacgtcgagctgccgctggtc
cacctgctggccggcatggagcaggtcggcatcgcggtggacggggaccacctcgccgag
ctcgagcagcacttcgccggcgaggtccgcgcggccgcggacgcggcgtacgaggtcatc
ggcaaggagatcaacctcggctcgcccaagcagctccaggtggtgctcttcgacgagctg
gggatgccgaagaccaagcgcaccaagaccggctacaccaccgacgccgacgcgctgcgc
gggttgtacgtccagaccgagcacccgttcctcgagtacctgttgcgccaccgcgacgtg
gcgcgactgcgtcagacggtggagggcctgctcaagaccgtgcagccggacggccggatc
cacaccaccttcaaccagaccatcgcggccacggggcgtctctccagcaccgaccccaac
ctgcagaacatcccggtccgcaccgaggaggggcgccgcatccgggaggcgttcgtcgtg
ggcgagggctacgactgcctgatgacggccgactacagccagatcgagatgcggatcatg
gcgcacctgtccgaggacgagctgctcatcgaggcgttccgcaaccgcgcggacttccac
gccacgacggcggcgcgggtgttcgacgtggagcccgacgaggtcacccaggagatgcgg
gccaagatcaaggcgatgaactacggcctcgcctacggtctgtccgccttcggcctgggc
cagcagctcggcatcgagccgggcgaggcgcggggcctgatggaggactacttcgagacc
ttcggcggcatccgggactacctcgacggcgtcgtcgacgaggcgcggcgcgacgggttc
accgagacgatcatgggccggcgccgctacctgcccgacctgaccagcgacaaccggcag
cggcgcgcgatggcggagcggatggcgctcaacgccccgatccaggggtcggccgcggac
ctgatcaaggtggcgatgctgcacgtgcaggacgccatcactgcggccgggctctcctcc
cgcatgctgttgcaggtgcacgacgagctcgtgctcgaggtcgcgccgggggagcgggac
gcgctggaggagatcgtgcgcgagcagatgggccgtgccgccgagctcaccatcccgctc
gacgtctcggtcggcaccggcgccacctggcacgaagccgcccactga
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