Nocardioides panacisoli: KUV85_05180
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Entry
KUV85_05180 CDS
T08184
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
npc
Nocardioides panacisoli
Brite
KEGG Orthology (KO) [BR:
npc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npc03009
]
KUV85_05180 (rimK)
Ribosome biogenesis [BR:
npc03009
]
Prokaryotic type
ribosomal protein modification factors
KUV85_05180 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
TrkA_C
Dala_Dala_lig_C
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QYJ05080
LinkDB
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Position
complement(1052742..1053935)
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AA seq
397 aa
AA seq
DB search
MKLAILSRAPRSYSTRRLRSAALDRGHQVKVLNTLRFAIDLSDVEPDLQYRGKQLTDYDA
VLPRVGSSITYFGTAVVRQFEQMDVYTPNTAYGITNSRDKLRATQILSRHHIGMPATTFV
RDRADVIPAIERVGGAPVVIKLLEGTQGIGVILAPDFKVAEAIIETLQSTRHQVLVQRFV
KESKGRDIRALVVGDRVVAAMRRTAKGDEFRSNVHRGGTVEAVTLDPEAERVAVRSSQIM
GLRVAGVDMLESDDGPLVMEVNSSPGLEGIEAATKLDVAGAIIDYIDNQVAFPQIDIRER
LSISTGYGVAEIVVHGDAEMVGKQLGDSGLRERDISVLTLHRGTSVIPNPYSSHVLEAED
RLLCFGNLEEMRGMIPTRSRRRKRVKRLPKTPLTDDD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgcgatcctctcacgcgcgccgcgctcctacagcacacggcgcctccgttca
gccgccctcgatcggggccaccaggtgaaggtcctcaacacccttcgcttcgccatcgat
ctctccgacgtggagccagacctgcagtaccgaggcaagcagctcaccgactacgacgcg
gtgctgccccgggtcggcagctcgatcacctacttcggcaccgccgtcgtgcggcagttc
gagcagatggacgtctacacgcccaacacggcgtacggcatcaccaactcccgcgacaag
ctgcgggcgacccagatcctgtcccgccaccacatcggcatgcccgcgacgacgttcgtg
cgtgaccgtgccgacgtgatccccgcgatcgagcgcgtgggcggtgcgccagtcgtcatc
aagctgctggagggcacccagggcatcggcgtgatcctcgcgcccgacttcaaggtggcc
gaggcgatcatcgagacgctgcagagcacgcgccaccaggtgctggtgcagcggttcgtg
aaggagagcaagggacgcgacatccgtgcgctcgtggtcggcgaccgcgtggtcgccgcg
atgcggcgcaccgccaagggcgacgagttccgttccaacgtccaccgcggcggcaccgtg
gaggccgtgacgctggaccccgaggcggagcgggtcgcggtccgctcctcgcagatcatg
ggcctgcgggtggccggtgtggacatgctcgagagcgacgacggaccgttggtgatggag
gtcaactcctcccccgggctggagggcatcgaggcggcgaccaagctcgacgtcgcgggc
gcgatcatcgactacatcgacaaccaggtcgcgttcccgcagatcgacatccgcgagcgg
ctcagcatctccaccgggtacggcgtcgcggagatcgtcgtccacggcgacgcggagatg
gtcggcaagcagctgggcgactccggcctgcgcgagcgtgacatcagcgtgctcacgctg
caccgcggcacctcggtcatccccaacccgtactcctcccacgtgctggaggccgaggac
cggctcctgtgcttcggcaacctggaggagatgcgcgggatgatccccacgcggtcccgg
cgccgcaagcgggtcaagcgcctgcccaagacgcccctcaccgacgacgactga
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