Nocardioides panacisoli: KUV85_05725
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Entry
KUV85_05725 CDS
T08184
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
npc
Nocardioides panacisoli
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QYJ05180
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Position
complement(1165625..1166557)
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AA seq
310 aa
AA seq
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MASPFVEIEVDDRVVKVTNPERVYFPDLGATKLDLVEYYLAVGPGIVNALWERPCMLHRF
PKGLAGDKVHQKRLPQGAPAWVETVELTFPRWNRTADELCVTELGAVIWAVQMSTVEFHP
WNSRRGAVEEPDEWRIDLDPGPEAPYAAVREAAHVAHEVLDDLDAVGFPKTSGSKGLHVY
VRVRPDHGHQVVRRAALAFARECERRAPDVITTAWWKKDRDPAHVFVDYNQNARDHTIAA
AYSVRGLPDARVSTPIRWDEVDDVDPHDFTIETVPDRFAELGDLHEAIDEHVFDIAPLLE
WADAAELPED
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcccttcgtggagatcgaggtcgacgaccgggtcgtgaaggtgaccaacccg
gaacgggtctacttccccgacctcggcgccacgaagctcgacctcgtcgagtactacctc
gcggtcggaccggggatcgtcaacgcactctgggagcgaccgtgcatgctgcaccgcttt
cccaagggcctcgccggcgacaaggtgcaccagaagcggctgccgcagggtgcgccggcg
tgggtggagacggtcgagctgaccttcccgcgctggaaccgcaccgccgacgagctctgc
gtgaccgagctcggcgccgtcatctgggcggtgcagatgtcgaccgtggagttccacccc
tggaacagccgccgcggcgcggtggaggaacccgacgagtggcgcatcgacctcgacccc
ggaccggaggcgccgtacgccgcggtgcgcgaggccgcgcacgtcgcgcacgaggtgctc
gacgacctggatgcggtgggattcccgaagaccagcggcagcaaggggctccacgtctac
gtccgggtccggcccgaccacggccaccaggtcgtccggcgcgcggcgctcgccttcgcc
cgcgagtgcgaacgacgcgcccccgacgtcatcaccaccgcctggtggaagaaggaccgc
gacccggcccacgtcttcgtcgactacaaccagaacgcacgcgaccacaccatcgccgcg
gcgtactcggtccggggcctgcccgacgcccgtgtctcgacgccgatccggtgggacgag
gtcgacgacgtcgacccccacgacttcaccatcgagacggtgccggaccgcttcgccgag
ctcggcgacctgcacgaggcgatcgacgagcacgtcttcgacatcgcaccgttgctggag
tgggccgacgccgccgaactgcccgaggactga
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