Nocardioides panacisoli: KUV85_08095
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Entry
KUV85_08095 CDS
T08184
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
npc
Nocardioides panacisoli
Pathway
npc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUV85_08095 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npc03021
]
KUV85_08095 (rho)
03019 Messenger RNA biogenesis [BR:
npc03019
]
KUV85_08095 (rho)
Transcription machinery [BR:
npc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KUV85_08095 (rho)
Messenger RNA biogenesis [BR:
npc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KUV85_08095 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QYJ05627
LinkDB
All DBs
Position
complement(1649718..1651499)
Genome browser
AA seq
593 aa
AA seq
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MTEASDATTPAPEKAPKKRGGLNSMLIADLKAMANGMGVAGANNMKKAQLVEAIKAQQSQ
ATSDAQQAADAKQSGQSGQSAQSGGSNRPDRADAPNGEDQRAKPAREDRGQGKSDQGKSD
QGKSDQGKPTKQDQPDQRKQGRPDQAKGRGKDQDRGKDDSEEKSGQGNRPGQQNPQGGGN
QGGGQGDDGRNRNRNRRRGRGRGGNREPDTEIREDDVLVPAAGILDVLDNYAFVRTSGYL
PGPDDVYLSLSLVRKYGLRRGDAIVGQVRQPREGERREKFNPMVRIDSVNGIDPEQAKER
PEFSKLTPLYPSERLRLETGPDNLIGRVIDIAAPIGKGQRGLIVSPAKAGKTMILQSVAN
SITANNPECHLMVVLVDERPEEVTDFQRSVKGEVISSTFDRPATDHTTVAELSIERAKRL
VEAGHDVVVLLDGITRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEGGGSL
TILATALIESGSKMDEVIFEEFKGTGNMELRLRRDFAEKRLFPAIDAVASGTRREELLMS
SDELQIVWKLRRVLSALDGQQALELLMGKLKKSRTNVEFLMEVQKTTPKPEDS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagcatccgacgccaccacgccggcgcccgagaaggcgccgaagaagcgcggt
gggctcaactccatgctcatcgccgacctgaaggcgatggcgaacggcatgggtgtcgcc
ggcgccaacaacatgaagaaggcgcagctcgtcgaggcgatcaaggcccagcagtcgcag
gccacgtccgacgcgcagcaggcggccgacgccaagcagtcaggccagtcgggccagtcc
gcccagtcgggcgggtcgaaccggcccgaccgtgccgacgcgccgaacggcgaggaccag
cgtgcgaagccggcccgcgaggaccgcggccagggcaagtccgaccagggcaagtccgac
cagggcaagtccgaccagggcaagccgaccaagcaggaccagcccgaccagcgcaagcag
ggcaggcccgaccaggccaagggccgcggcaaggaccaggaccggggcaaggacgactcc
gaggagaagtccggccagggcaaccgcccggggcagcagaacccgcaggggggcggcaac
cagggcggcggccagggtgacgacggccgcaaccgcaaccgcaaccgccgccgcggccgt
ggtcggggcggcaaccgcgagcccgacaccgagatccgtgaggacgacgtcctcgtgccg
gcggccggcatcctcgacgtgctcgacaactacgccttcgtgcggaccagcggctacctg
cccggtcccgacgacgtctacctgtcgctgtcgctggtgcggaagtacggcctgcggcgc
ggtgacgccatcgtcggccaggtgcgccagccccgcgagggggagcgccgggagaagttc
aacccgatggtgcgcatcgacagcgtcaacgggatcgaccccgagcaggccaaggagcgg
ccggagttctccaagctgaccccgctctacccgagcgagcggctgcgcctcgagaccggt
ccggacaacctcatcggacgcgtcatcgacatcgcggcgcccatcggcaagggccagcgt
ggcctcatcgtctcgcccgccaaggccggcaagaccatgatcctgcagtcggtcgcgaac
tccatcaccgccaacaaccccgagtgccacctgatggtggtcctcgtggacgagcggccc
gaggaggtcaccgacttccagcgttcggtcaagggcgaggtcatctcctccaccttcgac
cggcccgccaccgaccacaccacggtcgccgagctgagcatcgagcgtgccaagcggctg
gtggaggccggccacgacgtcgtcgtgctgctggacggcatcacccgcctcggccgggcc
tacaacctcgccgcccccgccagcggccggatcctctccggcggcgtggactccgcggcg
ctctacccgcccaagaagttcttcggcgccgcccgcaacatcgagggcggcggctcgctg
acgatcctggcgaccgccctgatcgagagcggctcgaagatggatgaagtgatcttcgag
gagttcaagggcaccggcaacatggagctgcggctgcggcgcgacttcgccgagaagcgg
ctcttccccgccatcgacgccgtcgcctcgggcacccgccgcgaggagctgctgatgagc
agcgacgagctccagatcgtgtggaagctgcgccgggtgctgtcagcactcgacggtcag
caggccctcgagctgctgatgggcaagctgaagaagtcccggaccaacgtggagttcctc
atggaggtccagaagaccacccccaagcccgaggactcctga
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