Nocardioides panacisoli: KUV85_16960
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Entry
KUV85_16960 CDS
T08184
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
npc
Nocardioides panacisoli
Brite
KEGG Orthology (KO) [BR:
npc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npc03016
]
KUV85_16960
Enzymes [BR:
npc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KUV85_16960
Transfer RNA biogenesis [BR:
npc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KUV85_16960
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QYJ03990
LinkDB
All DBs
Position
complement(3472337..3473674)
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AA seq
445 aa
AA seq
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MGEETTDPPLLTLRDGLPPVIDTEAALAEYCALLAAGTGPVAIDAERASGYRYSNRAYLI
QVRRDGAGTALIDPIPFASMAPLQEAIGEAEWILHAATQDLPCLAEVGLFPHALFDTELA
GRLLDYPRVGLATLVETLLGRRLKKEHSAVDWSTRPLPEPWLEYAALDVEVLVELRAVLV
EQLAEAGKSDWARQEFDHLRGFTPPERSEGWRRTSGMHKVRGRRALAAVRELWVARDEIA
QEQDVTPGRLIPDSAISAVATAMPTSRRTLLDTKGFHGRGARRYAATWVAALQRASEMTD
EELPTRAPRGDGPPAPRAWADKDPVAARRLELARAAVKKLSEEHQVPPENLLTPDHLRRV
MWAPPRTREPVSLLEEVIDRLGQLGSRGWQVGLTGQALAHAVLQADAEAAARATTAETAQ
EPESSEEPSSSDSSSEPSDSSSDGS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggagaccaccgacccgcccctgctgacactgcgcgacggcctgccgccggtg
atcgacaccgaggcggcactggcggagtactgcgcgctgctggcggccgggaccggcccg
gtggcgatcgacgcggagcgggcctcgggctaccgctactccaaccgggcctacctgatc
caggtacgccgcgacggcgccggcaccgccctgatcgacccgatcccgttcgcctccatg
gccccgctgcaggaggcgatcggcgaggccgagtggatcctgcacgccgcgacccaggac
ctcccctgcctcgccgaggtcgggctctttccccacgccctgttcgacaccgagctggcc
ggccggctgctggactacccgcgcgtgggcctcgcgaccctggtcgagacgctgctgggc
cgccggctgaagaaggagcactcggcggtcgactggtcgacgcgaccgctgcccgagccg
tggctggagtacgccgcactcgacgtggaggtgctcgtcgagctgcgtgcggtgctggtc
gagcagctcgccgaggccggcaagagcgactgggcgcgccaggagttcgaccacctgcgc
ggcttcacgcccccggaacggtccgaggggtggcggcgtacgtcgggcatgcacaaggtg
cgcggccggcgcgcgttggccgcggtgcgcgagctgtgggtggcccgcgacgagatcgcc
caggagcaggacgtcacgccgggccggctgatcccggactcggcgatcagcgccgtggcg
accgcgatgccgacgagccgccgcacgctgctggacaccaaggggttccacggccgcggc
gcgcgacggtacgccgccacgtgggtggccgccctgcagcgggcgagcgagatgaccgac
gaggaactgccgacccgcgcgccccggggcgacggcccgccggcaccgcgggcgtgggcg
gacaaggacccggtggcggcgcggcgcctggagctggcgcgtgcggcggtgaagaagctc
tccgaggagcaccaggtgccgccggagaacctgctgacgccggaccacctccgccgcgtg
atgtgggcgccgccgcgcacccgcgagccggtgtcgctgctggaggaggtcatcgaccgc
ctgggccagctgggatcgcggggctggcaggtcgggctgaccggccaggcgctggcgcac
gcggtcctgcaggccgacgcggaggcagcggcgcgtgccaccaccgccgagacggctcag
gagccggagtcctccgaggagccgtcctcgtccgactcgtcctcggagccctccgactcc
tcctcggacggctcgtag
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