Nothoprocta perdicaria (Chilean tinamou): 112942498
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Entry
112942498 CDS
T07556
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04140
Autophagy - animal
npd04148
Efferocytosis
npd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112942498 (VPS18)
04148 Efferocytosis
112942498 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112942498 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112942498 (VPS18)
Membrane trafficking [BR:
npd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112942498 (VPS18)
Hops complex
112942498 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
Lact-deh-memb
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
DUF5600
zf-RING_2
Nup54_57_C
DUF2229
zf-rbx1
TMEM249
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
112942498
NCBI-ProteinID:
XP_025889231
Ensembl:
ENSNPEG00000003567
UniProt:
A0A8C6YZU6
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVPPSRAAVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGTETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRLVYVLEEESGPVPVCCLEIERGIEGKFFIIATTQKRLFQFVGKVPEGTE
HQGFSSIFAVHADYLPSFREFPATFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSEERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDGVKAVCTLNGQIVFQDLFL
EKFGTLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLNNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDSSKRNLYLDTREKFRTFLGSPKNKDCLFNNR
TSIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALSVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSKLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAAAGQPSKGHHRPKDADTASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IEPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggacgagtacgaggactcgctgtaccgctcggcctcggtgccgccc
agccgcgccgccgtgggcatcccgcactccggttatgtgaatgcacgactggaaaaggaa
acaccaatatttaataagcaaaggattgatttcactcctccagagaaaattaacagcctt
gtggtctcctctaaccagctctgtatgagccttggcaaagacactcttctcaggattgat
cttgggaaaccagatgagcctaatcaggtagagttgggacgcaaagatgaagctaaagtc
tacaagatgtttttggaccatacaggctctcatctcctgattgctttgaacaccagtgaa
tgcctttacctaaacagaagtgttcagaaagtgcgagcactgtctcgctggaaaggccac
ttgattgaaagtgtgggctggaacaaatttctaggcacagagaccaataccgggcctatt
ctggtggggacagcccaggggcagatctatgaggctgagatctctgtcagcgaggggagc
ctcttcagcaccaaccctgaccagtactttcgcctggtttacgttctggaggaggaatcg
ggacctgtcccagtctgctgcttggagattgaacgaggcatagaagggaaattttttatt
atagctaccactcaaaaaagactctttcagtttgttggcaaggtccctgaagggacagag
catcaaggcttcagctccatatttgctgtgcacgctgactatttgcccagtttccgggag
tttccggccacttttggcttcagtgaaatagccttctacaccccaaagctgcgctccaac
ccccgctcctttgcctggatgatgggaaatggtgtcttgtacggcacgttggactatagc
cggcccgattcaattctgagtgaggaacgggtctgggtttacccttctgatatagacata
actgtgaacaagccaatctccattgtacttacccagttccacttcctgttgctgcttccc
gatggggtgaaggctgtatgtactctgaatgggcaaattgtttttcaagatctgttcttg
gagaagttcggcacgctaacacgcatgatcaaagatcccactgtccagcagatatggatc
cacacagagaaagtagtgttccgctaccacgtccagcgggaatctagagatgtgtggaag
atgtacatgaacatgaacaaatttgatttagccaaagagtattgtaaagatcggccagag
tgcctagatattgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtaccta
gatagtgctaagtgttatgcactgacacagaactactttgaggaaattgcccttaagttc
attgaagccaaacaagaggaggccttgatggagtttctaatcaagaagctaaacaacctg
aagccttctgagaagacacagaccactctgctgaccacgtggttaacagagctttacctg
aactggctaggtatcttggaaggagattcctcaaagcggaatctctacttggatacacgg
gagaagtttcgcaccttcctgggaagccccaaaaacaaagactgtctgtttaataaccgc
acatctatttatgagctgctggcaagtcacggggacacggagcacatggtgtattttgca
gtcatcatgcaggactatgagcgagtagtagctcaccactgccagcacgatgagtatgat
gaagccctaagtgtgctgtccagacacagagatgagaagttgttctacaagttctctcca
gtcctcatacagcatattcctaagaaggtagttgatgcttggatttctatgggctcaaaa
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccatcagatatatggagttctgtgtctatcagctggaggaaactcag
caagccattcacaactatctactgtctctctacgctttgtgtcggccagactcgttgctg
tcctatctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtacgcg
ctgcgcttgtgtgcggaacatggacaccaccgtgcatgtgtccatatttacaaagtgatg
gagttgtacgaggaggcggtggatcttgctttgcaggtggatgttgatcttgccaagtcc
tgtgcagatctcccggaagatgatgaagaacttcggaagaaactctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgtctctccagctgt
gccctgctgaagattgaagatgtcctgcccttcttcccagacttcgtcactattgaccat
ttcaaggaggcaatctgcaactctctggaggactacaacaagcacatagaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaatccgagaggacatccaggaaatg
agaaataagtatggctctgtggaacctcaggaaaaatgtgctgcgtgtgactttccgctt
ctaaaccgccctttttaccttttcctttgtggccacatgtttcactacgactgcctcctc
caagcagtttttccaaaccttcctgcctataagcaggcaaaactggaagatcttcaaaag
aagctggcagctgctggccagccctctaagggccaccatcgtcctaaggatgcagatact
gctagcctggggaaggggcagcagagccgggaacagatcaaagccgatatcgatgatatt
gtggcagctgagtgtgtgtactgtggtgagctgatgatccggtccatagacaaacctttt
attgagccccagaaatatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
