Nothoprocta perdicaria (Chilean tinamou): 112942747
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Entry
112942747 CDS
T07556
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112942747 (COL5A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npd00536
]
112942747 (COL5A2)
Glycosaminoglycan binding proteins [BR:
npd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112942747 (COL5A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
TILa
Motif
Other DBs
NCBI-GeneID:
112942747
NCBI-ProteinID:
XP_025889525
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MMAVWVQTRTFFILAALLGHFVTIKAQEDEEYDGGEDGEEIACTQNGQMYLNRDIWKPSP
CQICVCDNGAILCDEIQCQDMLECENPQVPPGECCPVCPHTTRDFDTTIGRGRKGQKGEP
GVVPPVSGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGH
PTHQGPDGLSRPFAAQMAGLDEKSGLGSQMGLMPGSVGPVGPRGPQGLQGKQGGAGPTGP
PGEPGDPGPMGPVGSRGPEGPPGKPGEDGEPGRPGQAGEPGFPGSPGPRGFPGAPGLPGL
KGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGATGPLGPRGMPGERGRIGPQGAPGGRGQ
HGMPGKPGPMGPLGITGSPGFPGAPGVKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGL
PGTEGTDGSPGAKGPTGSPGTGGPPGLLGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGE
AGPKGEPGPQGPQGSIGPMGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGP
KGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR
PGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP
SGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE
RGEPGASGIQGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGD
RGGVGEKGAEGTAGNDGARGLPGPIGPIGPAGQTGEKGEPGPRGLVGPPGSRGNPGSRGE
NGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPPGPSGVPGLKGG
RGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGP
AGPPGGPGDKGDAGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK
QGPTGPPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGL
PGSPGGPGTPGPVGPPGDAGQRGETGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGD
RGQKGHRGFTGLQGLPGPPGPIGEQGSPGIPGPFGPRGPPGPVGPSGKDGSPGPLGPIGP
PGVRGTVGEAGPEGPPGDPGPPGPPGPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAP
DDHNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPSKKSGEYWIDPNQG
CVEDAIKVYCNMETGETCISANPSAIPRKTWWTSRSSDQKPIWYGLDMNRGSQFVYGDSA
VTQMTFLRLLSKEASQNITYHCKNSVGYMDDQTKNLKKAVILKGANDLEIKAEGNSRFRY
TVLHDSCSKXNGNVGKTIFEYRTQNVARLPIIDIAPVDIGSADQEFGIEIGPVCFV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagtctgggtacaaacgagaacttttttcatccttgctgctttattagggcac
tttgtaaccataaaagcacaagaagatgaggaatacgatggtggagaagatggggaggaa
atagcctgcacacagaatggccagatgtacctgaacagagatatttggaagccctcgcca
tgccagatttgtgtctgcgacaacggagctatcctgtgtgatgaaatccagtgtcaagat
atgctggaatgcgagaacccacaggtgcccccaggagagtgctgtcctgtgtgtcctcac
acaacacgtgactttgatacaactattggtagaggaagaaagggacaaaaaggagaacct
ggagtagttccacctgtttcaggaatacgaggacggccaggaccagctggacctccaggt
tcacaaggaccacgaggagaacgaggrcctaagggaagacctggtccacgtggtcctcaa
ggaattgatggggaacctggtatccctggccagcctggtgatcctggtcctccaggacat
cctacccatcaaggaccagatggactaagcaggccatttgcagctcagatggcaggactg
gatgagaaatctggacttggtagccagatgggactgatgcctggttcagtgggtccagtg
ggtccaagaggtcctcaaggtctccaaggaaaacaaggtggtgctggccccacaggtcca
cctggtgaacctggagatccaggacctatgggtccagttggttctcgtggaccagaagga
cctccaggcaaacctggtgaagatggtgaacctggtagaccaggacaagccggtgagcct
ggatttccaggatctccagggcctcgaggttttcctggtgctccaggtcttccaggtctc
aagggtcacaggggattgaaaggacttgatggtccaaaaggtgaaattggagcagctgga
gccaagggagaatcaggcccaacgggtgccatgggtgcaactggtcctctggggcctaga
ggaatgccaggagaaagaggtcgaattggaccacagggcgcccctggtggacgtggccag
catggcatgcccgggaagccagggcccatgggcccacttggcataactggttctccgggt
tttcctggtgctcctggtgtaaagggtgaagcaggtccaacgggtcctcgtggtcctgaa
ggtcctcaaggacaaagaggtgaaacagggccacaaggcccagctggatcgcaagggctt
cctgggactgaagggacagatggttccccaggtgctaagggcccaacaggatctccagga
actggaggcccccctggcttattaggtcctcctggttccccaggaccacaaggcagtact
ggtccgcctggtattcgaggccagccgggagatcctggtgttccaggtttcaagggagaa
gcaggacccaaaggtgaacctggcccacaaggtccccagggttccattggccctatgggt
gaagaggggaaaagaggtcctcgaggtgatccrgggtcagtaggtccaccaggtccagtt
ggagagaggggtgctcccggtaatcgcggttttccaggttctgatggcttgcctggacca
aagggtgctcaaggagagcgtggtccagcaggttcttctggtcctaaaggcgggcagggg
gatcccgggcgtcccggtgagcctggcctcccaggtgcaaggggtttgacaggaaatcca
ggtgttcaaggccctgaaggaaaacttggccccttgggtgccccaggagaagatggacgt
ccaggtccagcaggttcaataggaatcagaggtcaaccaggcagcatgggccttcctgga
ccgaagggcagcagtggtgatccaggaaaacctggagaagcaggaaatgcaggtgttcca
ggacagcgaggagcccctggtaaagatggtgaagttggtccttctggtcctgttggccca
tcaggactggcaggagaaagaggagaacaaggccctccaggtcctacagggtttcaggga
ttgcctgggccaccaggccctcctggtgagggaggaaaaccaggtgatcagggtgttcct
ggagatcctggtgctgttggtcctttgggtcctaggggagaacgtggcaatccaggagaa
aggggagagccaggtgcatcaggaattcagggtgaaaagggtatggctggaggtcatggt
ccagatggtccaaagggaagcccgggtcctagtgggacgcctggagatccaggcccacca
ggacttcaaggtatgcctggagaaagagggattgctggaactcctggcccaaagggtgac
aggggcggtgtgggtgagaaaggtgctgaaggtacagctggcaatgatggggcgagaggt
ctccctggtccaataggcccaataggtccagcaggtcaaactggtgaaaagggtgaacca
ggtcctcgtggtctagttggtcctcctggctctcgtggaaatcctggttcccgaggtgaa
aatggtccaactggtgctgttggttttgctggtcctccgggccctgatggtcagcctggt
gtaaaaggtgaacctggagaacctggacagaaaggagatgctggatctccgggaccacaa
ggtcttgctggatctcctggtccaccaggtccttcaggtgttcctggtctgaaaggtggt
cgaggaacgcaaggtccgcctggcgctactggattcccaggatctgctggaagagttggg
cctccaggacctactggagctccagggcctgctggacctattggtgagccaggaaaagaa
gggcccccaggtcttcgtggtgatcctggttctcatggccgtgtgggagatcgtgggcca
gctggacctcctggaggtcctggggacaaaggtgatgcaggagaagacgggcagccgggc
ccagatggtccccctggtccagcaggaactactggtcaaagaggtattgttggtatgcca
gggcagcgaggagagagaggcatgcctggcctgccaggtcctgcaggcacaccaggaaaa
caaggtcccacagggccaccaggtgataaaggtcctccaggaccaattggtcagtcaggt
gccactggacctgttggtgaagctggtccagaaggacctgctggtaatgatggtactcct
gggcgagatggagctgtaggagaacgtggtgatcgtggtgaacctggacctgcaggctta
ccaggttccccaggaggtccaggaactccaggtcctgttggccctccaggagatgcagga
caaagaggtgaaactggttctcgaggtccaatgggtcccccaggtcgtgcaggaaaaaga
ggcttgcctggtcctcaagggcctcgtggtgacaaaggcgacaatggagatcgaggtgat
aggggccagaaaggacacagggggttcaccgggcttcaaggtcttcctggtcctccgggt
cctattggtgaacagggaagtcctggcattccaggtccttttggtcctcggggtcctcca
ggtccagttggtccttcaggcaaggatggaagtcctggaccacttgggccaattgggcct
cctggtgttagaggaactgtgggagaagctggacctgaaggtccaccaggtgatccaggc
cctccaggtcccccaggccctccaggccaccttactgctgccattggtgacattatggga
cactatgatgatgctatggcagatccactaccggagtttactgaagatgaagcagcccca
gatgatcataataaaacagatccaggagtccatgccacactgaagtcactgagcagccag
atcgagactatgcgcagtcctgatggctcaaaaaagcatccagcacgracctgtgatgac
ctgaagctttgccacccctccaagaagagtggcgaatattggattgatcctaatcaagga
tgtgttgaagatgctataaaagtgtactgcaacatggaaactggagagacctgcatctct
gcaaacccatctgctatcccacgcaaaacgtggtggaccagcagatcatctgatcagaag
cctatttggtatggccttgatatgaacaggggatcgcagtttgtgtatggggatagcgct
gtcactcagatgacattcctgcgccttctatcaaaggaggcttcccagaatatcacttac
cattgtaagaacagtgttgggtacatggatgaccagaccaagaacctgaaaaaagctgta
attctgaaaggggccaatgacctggagatcaaagcagagggaaacagccgattcagatac
actgttcttcatgacagctgttctaaacrtaatgggaatgtgggcaagactatctttgag
tacagaacgcagaatgtggcgcgcttacccatcatagacatagcaccggtggacatcggc
agcgctgaccaggaatttggaattgaaattgggccagtttgttttgtgtaa
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integrated database retrieval system
