Nothoprocta perdicaria (Chilean tinamou): 112942932
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Entry
112942932 CDS
T07556
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
npd03037
]
112942932 (NPHP1)
Cilium and associated proteins [BR:
npd03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
112942932 (NPHP1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
112942932
NCBI-ProteinID:
XP_025889780
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSARRARGPLQRVQRRSRELREQVAALRDESAAAPAPERRKALARRGEKAQSVCLSCFQY
RCVQLRKSVEENTNVLQNLKKADEPAPVGNYNQRKEEEEKLLQKLSQQLQKLSLILDQDP
YNVDQKHPQTEDENEEDDGEEDEESSEEEDSDETDDEDALLDDPDVKECIAVGNFNAQQE
GDLTLKKGEVLLIHDKKADGWWVAENSKGERGLVPKTYLAVYNNDEESQEESEEQIEEED
ETATGTNIERRTDSHWSAVRKAVTENDTVEILTTMGAIPAGFRLSTLHQLLEEGNQFRAS
YFIQPELTPSQLAFKDLVWNPEKNTIHRRTSRVSMILTLLSCKMIPVPGVSIQVLSRHVR
LCLFDGNRVLSNIHTVRATWLPKNPHTWTFSPRVTGILPSLLDGDCFVRSNSSSSDIGIL
FELGITYIRNSTGERGDVSCGWVFLKLFTSDGVPIPSKTYELLLNGGTPYERGVEVDPSI
SRRASSNAFHQILTFRKQPALLVKLRSLSVESKDRLNLLPETLIGSRCYIHLLVFYRQIL
GDALLKDRISMQNADLIFHPILATFPQVMDQPDLIDALRSAWADKEQTLKRSEKRDQEFL
KAQFVLVYHDSVFPLLHSTLLPSPKWAEEETEASRWKVIADFLKKARENEGALQFLLSPE
NSHKAFDISELTYDFLRETRKNSPPV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcggcgggcgcggggcccgttgcagcgggtgcagcggcggagccgggagctg
cgcgagcaggtggcggcgctgcgggacgagagcgcggcggccccggcccccgagcggcgc
aaggccctggcgcggagaggtgagaaagcacagtctgtctgtctgtcttgctttcaatac
agatgtgtgcaactgaggaagtctgtagaggagaacacaaacgtacttcagaatttgaaa
aaggctgatgagcctgcacctgtagggaattataatcagaggaaagaagaagaagaaaaa
ctattgcaaaaactttctcagcagctgcagaaactttctctaatactggatcaggatcca
tacaatgtagatcagaagcatccccaaacagaagatgaaaatgaagaggatgacggtgaa
gaagatgaagaaagtagtgaggaggaagacagtgatgaaacagatgatgaagatgcattg
ttggatgatcctgatgttaaagaatgtatcgcagtaggaaactttaacgcacagcaagaa
ggggacctcacgttgaaaaaaggtgaagtcctgcttatacatgacaagaaggccgacggc
tggtgggtagctgaaaattcaaaaggggagagaggacttgttcctaaaacctacctcgca
gtctataacaacgatgaagaaagccaagaggaaagtgaagagcagatagaggaggaagat
gaaacagcaactggaaccaacattgaaagaaggacagattctcactggagtgctgtaaga
aaagctgtcacagagaatgacacggtagagattttgacgaccatgggagccattcctgca
ggattccgcctatccacactccatcagctcttagaagaaggtaatcaatttcgagcaagt
tactttatacagcctgaactcactccctcccaactggcttttaaagacttggtatggaac
cctgaaaaaaatactatccatcgaagaacatctcgagtatctatgattttaactttactg
agctgcaaaatgattcctgtcccaggagttagcatacaggtcctcagtagacatgttcga
ctttgtctattcgatggcaatcgggtgctcagtaacattcatacagtgagagctacgtgg
ttacctaaaaatcctcatacgtggaccttttctccaagggtaacaggcattttacccagt
ttgctggatggtgactgttttgtcaggtccaattcttcatcttcagatattggaatatta
tttgaacttggcatcacttacattcgcaactcaacaggtgaaagaggagacgtaagctgt
ggctgggtatttctgaagctttttacttctgatggagtacctattccttccaagacgtat
gagctgttattgaatggtggtaccccttatgagagaggtgttgaggttgacccgtcaata
tcgagaagagcaagcagtaatgcttttcatcaaattctgacgttcagaaagcagcctgca
cttcttgtgaagctgaggtcgttaagcgtggagtcgaaagacaggctgaatttgctacca
gaaacattaattggtagtaggtgctacatccatctcttggtattttatcgacaaatactt
ggtgacgccctcctgaaagacagaataagcatgcaaaatgctgatttaatttttcatcct
attttagcaacttttccccaagtcatggatcagccagacctgatagatgcacttcggagc
gcttgggcggataaagaacaaactttgaagagatcagagaagcgagaccaagaatttctg
aaggcgcagtttgtcctggtgtaccacgactctgtctttcctctcctgcactccactctg
ctccccagtcccaagtgggcagaggaggagactgaagcttctcgctggaaggtgattgcc
gacttcctgaaaaaggcccgggagaacgagggagcacttcagttcctgctctccccagaa
aactcccacaaagcctttgatatctccgagctgacttacgatttcttacgagaaactagg
aaaaacagccctccggtatga
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