Nothoprocta perdicaria (Chilean tinamou): 112943012
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Entry
112943012 CDS
T07556
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112943012 (HTT)
04131 Membrane trafficking [BR:
npd04131
]
112943012 (HTT)
03029 Mitochondrial biogenesis [BR:
npd03029
]
112943012 (HTT)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112943012 (HTT)
Membrane trafficking [BR:
npd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112943012 (HTT)
Mitochondrial biogenesis [BR:
npd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112943012 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
112943012
NCBI-ProteinID:
XP_025889859
Ensembl:
ENSNPEG00000001863
LinkDB
All DBs
Position
Unknown
AA seq
2555 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSSTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTACGGIAQVSVSKDEPAVR
NRSGSIVELIGKILLGEEEGLEDDSETRSDVSSASFAASMKGEISSELASSSGVSTTGSV
VSSGADPTGHDIITEQPRSQHTLQSDSVDLSSCDLTSTATEGEDDVLSRSSSQISAVQSD
ATMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGTDSQYSGMQIGQLQDEEE
EPANILQDDSSESFRNSSVALQQPHLLPTTSHSRQPSDSSVDKFTAKEETLDPGDHETKP
SRVKGDIGHYTDGNAAPLVHCVRLLSASFLLTGEKGALVPDRDVRVSVKALAVSCVGAAV
ALHPESFFSKLYKTPLEAMGEQYEEQYVSDILNYIDHGDPQIRGATAILCGTIVNSVLIK
SRFDAEKWLTSVRSLTGNLFSPVDCIPLLQKTLKDESSVTCKLACTAVRHCIVSLCSSSY
SELGLQLVVDLLTLRNSSYWLVRTELLETLAEVDFRLVNFLEGKTDSLHRGVHHYTGLLK
LQERVLNDVVVHLLGDEDPRVRHVAAASLIRLVPKLFYSCDQGQADPVVAVARDQSSVYL
KLLMHETQPPSHFAVSTITRTYRGYSMVQSSTDVTVENNLSRVVAEVSHALTTSTTRALT
FGCCEALCLLSMTFPVCTWSMGWNCGVSQTSPSDEAQKGCSIGMAGMVLSLLSSAWFPLD
LSAHQDALILTGNLLAASAPKCLKNPWSVEEDANQGVAKQEEPWPALADRTLVTLVEQLF
SHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKGKERESVEQTSVPMSPKK
GAETSPAARQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKATHANYKVTLDLQNNNEK
FGCFLRSALDVLSQILEFATLQDIGKCVEEILGYLKSCFNREPTMATVCVQQLLKTLFGT
NLASQYDGLSSNPSKSQGKAQRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAE
QEHDASGWFDVLQKVSAQMKTGVTSVTKHRADKNAIHSHIRLFEPLVIKALKQYTTTTSV
QLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLV
LLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGK
ELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQ
MHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMASVSTVQLWISGILAILRV
LISQSTEDIVLSRIQELSFSPYLISCQAINRLRRGENNLSAPEDRTEAKQVKYLPEETFS
RFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATR
LFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVNYTNYNWWSEVHQTPKRH
SLSTTKLLSPQISGDSDESDLESKRGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIV
NHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLAAPTILKKTLQCLEGIH
LSQSGAVLTLYVDKLLSTPFRVLARMVDTLACRRVEMLLAANLQNSITQLPVEELDRIQE
YLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDGENQPPLENVILDKDWYV
SLVRSQCYVKSDSALLEGAELVNKIPESELNSFMTNKEFNLSLLAPCLSLGMTEISKDQR
SSLFETARRVTLDHVSAIVQNLPAIHQVFQPLSLSEPSAYWKKLNDIFGNEVMYQSVMTL
CRALAQYLLLLSKLPAALHVPADKERDILKFVVMSVEAISWYLKNDRIPLSLDLQAALDC
CCLTLQQTNLWNLLATAANVTYACSLINCIRFIIEAVAVEPGNQLLSPERKKNTSKGLNE
GEVDSNTQRTKHIAAACEMIAEMVECLQTVLALGHSRNSNIPAFLTPVLKNIIISLARLP
LVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIFKEFIYRINTLGWISRTQ
FEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAITSLVLSAMTIPVAGNPA
VSCLEQQPRNKPLKALDTRFGRKLSVIRGIVEQEIQAMVSKRDNIATHHLYQAWDPVPSL
SPATTGALISHDKLLLQINTEREIGDMDYKLGQVC
NT seq
7668 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctcatgaaggccttcgagtcgctgcgctccttccagcagcag
caaggcccggccgccatccctgaggagccgctgcagagaccaaagaaagaactttcatct
accaagaaagatagagtgaatcactgcctgacaatatgtgaaaacatagttgctcagtct
ttaagaaattctccagaatttcagaaactgctggggattgctatggaactcttcctgctc
tgcagcgaggatgcagaatccgatgtccgtatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattcaaatcttcctaggttacaattagaactgtataaagagatt
aaaaagaatggtgcttcccgaagcctacgtgctgcactctggagatttgctgagcttgcc
catctagttcgtccacaaaagtgcaggccctacctggtgaacctgctgccctgtctaacg
cgaataagtaagagacctgaagaatcggtacaggagacactagctgcagcgataccgaaa
atcatggcagcatttggcaactttgcgaatgacaatgagattaaggttttgttgaaggct
ttcatagctaatctgaaatccagttccccaactatccgtcgaacggcagcaggatcagca
gttagcatctgtcagcattcacgaagaacccagtatttctatgcctggttattgaatgta
cttttaggcttgttggttcctgtagaggacgatcatcctacactcttaattctcggtgtg
ttgcttacactaagatatctcatacctttattgcaacaacaagtgaaggacaccagcctg
aaaggcagcttcggtgtaacaaggaaggaaacggagatttcaccttccccggaacagctt
atacaggtttatgaattgactctgcattacactcagcatcaggaccacaatgttgtgact
ggagctttagagttactgcagcagctcttccgaacgccgccgcccgagctcctgcacgcg
ctgaccgcctgcgggggcattgcacaggtcagtgtgtccaaagatgaacctgccgtcagg
aaccgcagtggaagcatagtggaacttataggtaaaatccttctcggtgaagaagaaggt
ttggaggatgattctgaaactcgatcagatgtcagttctgcatcctttgcagcttctatg
aagggtgagataagcagtgaactggcttcttcatcgggtgtatcaacaactgggtcagta
gtgagttcaggtgctgatcctactggccacgatatcattactgagcagcctcgttcacaa
catacattgcaatcagactctgtagacctgtccagctgtgatttgaccagcacagctact
gagggggaagatgatgtgcttagccgaagctccagccaaatcagtgctgtccagtcggat
gccactatggacttgaatgacggtacacaggcttcctcaccaattagtgatagctctcag
actaccacagaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttg
gagggtactgatagccagtattctggaatgcagattgggcagctgcaggatgaggaagaa
gagcctgcaaatattctccaagatgattcatcagagtctttcagaaattcttcagttgct
cttcaacagcctcacctgttgccaaccacgagccatagtaggcagccttctgatagcagt
gtagataaattcacagcaaaagaagagacattagatcctggtgatcatgagactaagccg
tcccgagtaaagggagacataggtcactacactgatgggaatgctgcgcccttagtgcac
tgcgttaggcttctgtcagcctcttttctactcactggggagaagggagctctagttcct
gacagggatgtgagagtcagtgtaaaagccctggcagtcagttgtgttggagcagctgtt
gcccttcaccctgagtcgtttttcagcaaactgtataagacaccccttgaagccatggga
gaacagtatgaagagcagtatgtatcagatattctgaactacattgaccatggagatccc
cagattagaggagctactgccattctctgtggaacaatcgtcaactctgttctaattaag
tcccggtttgatgccgaaaaatggctaacaagcgtccgaagcttaacaggaaatctcttc
tccccggtagactgcatacccctgctacagaagacgctgaaagatgaatcctctgttacg
tgcaaactggcttgtacggctgtgaggcattgcatcgtgagcttatgtagtagcagttac
agtgaacttggtttacagttagttgttgacctccttacgctgagaaatagctcttactgg
ctagtaagaacagaactgctggaaacacttgcagaggtagattttcggctagtcaatttt
ttggaaggaaaaacagacagcttgcacagaggagttcatcattatactggtctcctaaaa
cttcaggagagagtgctcaatgatgttgtagtccatctacttggagatgaagatccaaga
gtgcggcatgtagctgcagcctcattaataaggcttgttccaaagctgttttatagctgt
gatcaaggacaggctgatccagtcgtggcagtagcaagagatcaaagcagcgtctacctg
aagctactaatgcacgagacccagcctccatctcactttgcagtgagcacgatcacaaga
acatacagaggttatagtatggtgcaaagttcaacagatgtcactgtggaaaacaacctc
tcaagggttgttgcagaagtttcccatgcattgacaacatccactaccagggcacttacg
tttggctgctgtgaagctttgtgtcttctctccatgacgtttcccgtctgcacctggagc
atgggatggaactgtggtgtttcccagacgagtccttcagatgaagctcagaagggctgt
tccattggaatggctggcatggtcctctccctgctttcatcagcatggttccctctggac
ctttctgctcatcaggatgcactgattttgactggaaacttgcttgcagcaagtgctccc
aagtgcttaaagaatccctggagtgttgaagaagatgccaaccagggtgttgcgaagcag
gaggaaccctggccagccctggcagacagaactcttgttactttagtggaacagcttttt
tctcatctgctgaaggtcattaatatttgtgcgcatgtaatggatgatgttgctcctggc
ccagcagtaaaggcagcgttaccttctctcacaaacccaccttcccttagtccaattcgg
aggaaagggaaagagagagaatctgtagaacagacatctgtgccaatgagccctaaaaag
ggtgctgaaactagtccagctgctaggcaaactgatgctacaggacctgttccaacaagt
aaatcatcatcagtaggaagcttttatcatcttccatcgtatctgaagttatatgatgtc
ttaaaagctacccatgctaattataaggttactttggatctccagaacaataatgaaaag
tttggatgtttcttacgatctgctttagatgttctgtctcaaattttggaatttgcaact
cttcaagacattggaaagtgtgtagaagaaattttgggatacctgaaatcatgtttcaac
agggaaccgacgatggcgacggtttgtgtgcagcagttattgaagacgttatttgggaca
aacttggcttctcagtatgatggcttgtcctcaaaccccagcaaatcccaaggcaaagcc
cagcgcttaggctcatctaatttgagacctggcctctatcattactgcttcatggcacca
tatacacattttacacaggcacttgctgatgctagtctaaggaacatggttcaggctgag
caagaacacgatgcttcagggtggtttgatgtgctgcaaaaagtttctgcacagatgaaa
actggtgttaccagtgtaactaaacatcgtgctgataagaatgctattcacagtcacatt
cgtttatttgaaccccttgtcataaaagcattaaagcagtacactactacaacatcagta
cagctgcaaagacaagttctagacttacttgctcaactggttcagctacgagttaactac
tgtcttctggattcagatcaggtgtttattggatttgtgttaaagcaatttgaatacatt
gaagttgggcagttcagggagtctgaagctattattcccaatatcttctttttcctggta
ttgctgtcttatgaacgataccactccaaacagataattggaattcctaagatcattcag
ctgtgtgatggcatcatggccagtgggaggaaagctgtaacacatgcaataccagccctg
caacccatcgttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaa
gagttggaaacacaaaaggaggtggtagtgtccatgctgctgagacttattcaataccac
caggtgctagaaatgttcatcttagttttgcaacaatgtcataaggaaaatgaagacaaa
tggaaaagattgtcccggcaaatagctgacattattcttccaatgcttgcaaaacaacag
atgcatatagattctcatgatgcgttgggagtgctgaacactttgtttgaaattttggcc
ccttcatcccttcgtccagtggacatgctgttacggagcatgtttgttactcctaaaaca
atggcatcagtgagcactgtccagttatggatttctggaatattagctatccttagagtt
ctgatttcacaatcaacagaagacatagttctatcccgtattcaggagctttccttctcc
ccatatttgatttcctgtcaagcaattaatagactgaggcgtggagaaaacaacttatct
gcaccagaggaccgtactgaggctaagcaggtgaaatatctgcctgaagagacattttct
aggttcttgctgcagctggttggcattctgctggaagatattgtcaccaaacaactgaaa
gtggacatgaatgaacagcaacacactttctactgccaggagctgggcacactgcttatg
tgcttaatacatatcttcaaatcagggatgtttagaagaatcacagctgcagccaccagg
ctttttacaggagatggatctgatggcagtttttacacccttgaaagtctgagtgatctt
gttcagtccatgattcccacacatccttctttagttctgctctggtgtcaaatcctgctt
cttgtcaattacaccaactacaactggtggtcagaagtacatcaaactccaaagagacat
agtctttctaccactaaattgcttagccctcaaatatctggagacagtgatgaatcagat
ttggaatctaaacgtggcatgtgcaatcgagagatcgtgagacgtggcgcactcattctc
ttctgtgattatgtttgtcaaaacctgcatgattcggaacacttgacctggcttattgtg
aaccacgttcaagacttgattaatctgtcgcatgagcctccagtacaggacttcatcagt
gctgttcacaggaattcagcagccagtggtctttttattcaggccattcaatcacgatgt
gagaatctagcagcacccacaattcttaagaagactttacagtgcttagaggggatacat
ctcagccagtctggggctgtcttaacattatatgttgataagcttctctctactccattc
cgtgtgctggctcgtatggtagacacactggcctgtcgtcgggtagagatgcttttggct
gcaaatctacagaacagcattactcagttacctgttgaagaactagatagaattcaggaa
taccttcagaatagtggcttggccacaagacaccaaagactttactcgctcttggacaga
tttcgtcttatggtggcaccagacacaactagtccttcacccctggttacctcacaccca
ctagatggggaaaatcaaccacctctagagaatgtaattcttgacaaagactggtatgtg
tcactagtgagatcccagtgttatgtcaagtctgactcagcactgctggaaggtgcagag
ctagtgaacaagattcctgagtctgaactgaactccttcatgaccaacaaggaattcaac
ctgagcttgctagctccttgcctaagccttggcatgactgaaatctcaaaagatcagagg
agcagcttgtttgaaacagcccggagggtgactctggatcatgtctctgccattgtacaa
aacctccctgccattcaccaggttttccagcccttgtcactatctgagccatcagcctac
tggaaaaagctgaacgatatctttggaaatgaggtgatgtatcagtctgtgatgaccctt
tgtcgtgcactggcccagtatttgttgttactctcaaaactaccagctgctctccacgtt
cctgcagacaaagagcgtgacatcctgaaatttgtggttatgtcagtagaggcaatatca
tggtatttgaaaaatgaccggattccactaagtttagatcttcaagctgctctggattgt
tgctgtctgacattgcagcagactaatctctggaatttgctggctactgcagctaatgtg
acatatgcttgctccttaattaattgcattagatttataatagaagcagttgcagttgaa
cctggaaatcaacttcttagtccagaaagaaagaagaacacttcaaaaggcctaaatgag
ggtgaagttgattcaaacacacagagaacaaaacacattgcggcagcttgtgaaatgata
gctgaaatggtagaatgtttgcagactgtgctggcactgggccacagcagaaactccaat
attccagcatttctgactcctgtcctcaagaacatcatcatcagtctggcaaggctgcct
ctcgtgaacagctacacaagagtccctcctttggtctggaagttgggctggtcaccaaag
cctgcaggtgactttggtacagtttttcctgaaatcccagtagagtttcttcaagaaaaa
gaaatcttcaaagagttcatctatcgtattaatacacttgggtggattagccggacccag
tttgaagagacctgggctactttgcttggtgtgcttgtaactcaacctatcgtaatggac
caagaagagaaccagcaagaggaagatacagagaggacccaaattaatgttcttgcagta
caagccataacgtccttggtgctgagcgcgatgacgatacccgttgccggcaacccggca
gtgagctgtttggagcagcagccccgcaacaagcctttaaaagctttggacacaaggttt
gggaggaagctaagtgttatcagggggattgttgagcaggaaattcaagcaatggtgtcg
aagagagataatattgctactcatcacttatatcaagcctgggaccctgttccatcactt
tctcctgctactacaggtgctcttatcagccacgataagctcttactgcagatcaatact
gaacgagaaataggagatatggattataaactgggacaggtttgttaa
DBGET
integrated database retrieval system
