Nothoprocta perdicaria (Chilean tinamou): 112943071
Help
Entry
112943071 CDS
T07556
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112943071 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
112943071
NCBI-ProteinID:
XP_025889955
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
PPPQGRAAGPRAPLWLRARLQALLFALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIET
DIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKREGENILTQEALQLHLEAAL
AASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQG
GSAYLPGRPDIQWSNLDPVQLMEELGQFTSLEGFKELLDKAEVGQAYMERPCLDPQDPQC
PSSAPNKQSQQNPDIPAELSGGCHGFSRKFMRWQEELILGGTTKDSQGKLLSAEALQTMF
LLMSPRQLFEHFKDDYEIHDISWSEEKAAAILETWQRKFVELAQDSIPSNATQNVHAFST
TTLNDIMKSFSDVSAIRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASG
LGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGT
SVALTSVSNMIAFFMAALVPIPALRAFSIQAAVVVVFNFAMVLFIFPAILSLDLHRREKR
RLDILCCFYSPCSSRVIQIQPQEFADANDNHASHPSPYGHPGMATSTQITTTVQAFTQCD
SSGHHIVTVLPPTSQVCTSPAVLLPPADPLGSQVFTPSSSTRDLLAQLDEAKGGRDCVPL
PFCRWSLSDFAREKYAPLLLQTQTKAVVVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDT
KAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQAFSTVKYVVREGNHDLPKMW
LHYFQDWLRGLQATFDRDWQAGRITHDSYRNGSEDGVLAYKLLIQTGNKKEPFNFNQLTT
RRLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPA
AQPLEFAQFPFYLSGLRRTADFVEAIESVRAICQEAAQRHGVLSYPSGYPFLFWEQYIGL
RHWFLLAISILLACTFLVCTLLLLNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVV
ILIASVGIGVEFTVHVALGFLTAVGSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSE
FDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPPEASPLDTSSRLPPAEPVPPCLG
PRGLYVRRAPAWPPAFADSSNTELGTARVPCDHGAFVVPPAPAHILLEAGKDPSFPHITV
LKPYKDSPEVPGKKEPPGAQQAAPLPPGEPSPTVPRDYPHPAAPQPCSPGTRPHRAARPP
RAALPAYSTHVQGPAGSYTTVTATASVTVALHPTLPGSYASFGPDGFSGGETDCLEEPLP
VPVPGGTVLPNAFELQNLGRHGAGARR
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
ccccctccgcagggcagggccgcgggcccccgcgccccgctgtggctgcgcgcccgcctc
caggcgctgctcttcgcgctgggctgccgcatccagcggcactgcggcaaggtgctcttc
gtggggctgctcgtgttcggcgcgctcgccgtggggctccgcgtcgcctccatcgagacc
gacatcgagcacctctgggtggaagcgggcagccgcgtcagccaggagctccgctacacg
aaggagaagctgggtgaggagtctgtctacacatcccaaatgctgatccagaccccgaag
cgggaaggcgagaacatcctgacgcaggaggccctgcagctccacctcgaggctgctttg
gctgccagcaaagtgcaagtctcgctgtacggaaagtcatgggatttgaacaagatctgc
tacaagtcaggtgtccccattatcgagaacggcatgatcgagaggatgattgagaagctc
ttcccctgcgtgatcctgacaccgctggactgcttctgggaagggtccaagctgcaggga
ggatcggcctatctcccaggccgcccggatatccagtggagcaacctggaccctgtgcag
ttgatggaggagctggggcagttcacgtccctggaaggcttcaaagagcttctggacaag
gcagaggtggggcaggcttacatggagcggccctgcctcgaccctcaagacccccagtgc
ccctccagtgcccccaacaagcagagccagcagaaccctgacattccagctgagctctcc
gggggctgccatggcttctccaggaagttcatgcgctggcaggaggagctgattttgggt
ggcacaaccaaagactcccagggcaagctactaagcgccgaggccctgcagaccatgttc
ctcctcatgagcccccggcagctgtttgagcacttcaaggacgactatgagatccacgac
atcagctggagtgaggagaaggcagctgccatcctggagacctggcagaggaaatttgtc
gagctggcacaggactccatcccttccaacgccacgcagaacgtccatgctttctccacc
accacgctcaacgatatcatgaaatccttctctgatgtcagcgccatccgggtggccgga
ggctacctcctcatgctggcttatgcctgtgtcaccatgctgcgatgggactgctccaag
tcccaaggggctgtgggcctggctggggtcctgcttgtggctctttccgtggcctcaggc
ctgggactttgctctctgctcggcatctccttcaatgcagccaccacacaggtcctgcca
tttctggctcttggcattggtgtggatgacatgttcctcttggctcatgccttcactgag
accagccagcacatccctttcaaggagcgaacaggcgagtgcctgaagcgcacagggacc
agcgtggctctcacctctgtcagcaacatgattgccttcttcatggcagccttggtgccc
atccctgccctacgtgccttctccatccaggctgcggtggttgtggtgttcaactttgct
atggtgctgttcatcttcccggccatcctaagcctggacctgcaccgccgggagaaacgc
cggctcgacatcctctgctgtttctacagcccttgctcctcacgtgtcatccagatccaa
ccccaggaatttgcagatgccaacgacaaccatgcctcccacccatccccctacgggcac
cctggcatggccaccagcacccagatcaccaccaccgtgcaggccttcacccagtgcgac
tcctcgggccaccacattgtcaccgtcctgccgcccacctcgcaggtttgcacttcgccg
gcggtgctcctgcctcccgccgacccgctgggctcacaggtcttcacgccatccagctcc
acacgggacctgttggcccagctggacgaggccaagggcgggcgggactgtgtgcccctg
cccttctgccgctggagcctctccgactttgcccgtgagaaatacgcgccgctcctgctg
caaacccagaccaaggccgtggtggtggtgctgttcctggcgctgctgggactgagtctc
tacggcaccaccatggtgcatgacggactctacttgacggacatcgtgccacgggacact
aaggctcacgcctttatctcggcccaattcaagtacttttccttctacaatatgttcatc
gtcaccaagggtggctttcactaccccggggcccaggctgccctgctcagcctgcaccag
gccttcagcaccgtcaagtacgtggtacgtgagggaaaccatgacctgcccaagatgtgg
ctccactacttccaggactggctgcgagggctccaggccaccttcgacagggactggcaa
gccgggcgcatcacccacgacagctatcgcaacggctctgaggacggggtgctggcctac
aagctcctcatccagactggcaacaagaaggagcccttcaacttcaaccagctgacgacg
cggcgactggtggatgaaaacggcatcatcccccctgacaccttctacatctgcctgacg
gtgtgggccagcaacgaccccctgggcttcgccgcctcccaggccaacttctaccctcca
ccacctgagtggatccatgacaagtacgacaccacaggcgagaacctgcgaatcccggca
gcccagccgctggagttcgcccagttccccttctacctgagcgggctgcgccgcacagcc
gacttcgtggaggccatcgagagcgtgcgggccatctgccaggaggccgcccagcgccac
ggggtgctcagctaccccagcgggtaccccttcctcttctgggagcagtacatcggcctg
cgccactggttcctgctggccatcagcatcctgctggcctgcaccttcctcgtgtgcacc
ctgctgctgctcaacccctggacggccggcatcatcgtctccatcctggccatgatggca
gtggagctgtttggcatcatggggctgatgggcatcaagctgagcgccatccctgtggtc
atcctcatcgcctcggtgggcatcggcgtggagttcacggtccatgtggctctgggcttc
ctgacggccgtggggagcaggaacgtgcgctcggccgcggcgctggaacacacctttgcc
cctgtgatggatggtgctgtttccaccctcttgggtgtcctcatgttggctggctctgaa
ttcgacttcattatgaggtacttctttgccgtgctcaccatcctgacgctgctggggctg
ctcaatggcctggtgctgctgcccgtcctgctctctgtcatcgggcctcccccagaggcg
tcccccttggataccagctcccgcctgcctccggcggagccggtgcccccgtgcctgggc
ccgcgggggctgtacgtgcggcgggccccggcctggccacccgcctttgccgactcctcg
aacacggagctgggcaccgcgcgggtgccctgcgatcatggtgcctttgtcgtgccccct
gccccagcccacatcctcctggaggccggcaaggaccccagcttcccccacatcacggtg
ctaaagccctacaaggacagcccggaggtcccggggaagaaggagccacccggtgcccag
caagcagccccgctgccccccggggaaccgagccccacggtgcccagggactacccgcac
ccagcagcgccgcagccctgctcgccgggcacgcggccgcacagagctgcgcggcccccg
cgggccgccctgcctgcctacagcacccacgtgcaagggccggccggcagctacaccacc
gtcacggccaccgcttcggtgacggtggccctgcaccccacactgcccggctcctacgcc
agcttcggccccgacggcttcagtggcggtgagacggactgcctggaggagccccttccc
gtgcccgttcccgggggcaccgtcctgcccaacgccttcgagctgcagaacctggggcgc
cacggggcgggcgcgaggcgctag
DBGET
integrated database retrieval system
