Nothoprocta perdicaria (Chilean tinamou): 112943229
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Entry
112943229 CDS
T07556
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112943229 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112943229 (EDC4)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112943229 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112943229 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
NBCH_WD40
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
112943229
NCBI-ProteinID:
XP_025890149
Ensembl:
ENSNPEG00000007873
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MRSVNENPRPLNSYNGDLNGLLVPEPVVAGDGPALAKPAHRSVSLGVLQEKQVICLSGDD
SSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLA
YAIRAASNGSAMVRVLSVSTAERTLLKGFTGAVADLAFAHLNSNQLACLDEAGNLFVWRL
AMDKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEENGEEGSQTLALLHEDRAEV
WDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQI
YIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTV
SWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGKAY
FSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAAGVLI
KLFCVHTKALQDVQIRFQPLHSPDVAASLPSHGSHEEFAFPDHMADLSTEGLGSEKGSVH
GSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQITVSPGSSVSSLTAVT
AMSSTSVTDTSMARTSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLADKLTP
KAPVPVAPGNPSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQR
SFAAAPGLAAEVLEPGLHADTMASAASALHLLSPRNRHNSDHSHHSLDMPQMDVDRLNAP
SLLETALTQENASSDSVVGQPWPAAPDITRETRNGMADSPRDEVEEKHKSSSYHRHSYHL
LQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKRKGK
KDDGEVNQSPRSSNNQVTPEFQDELMCILRNQQRELCELRQNQMELLQRLTDHLDAIQSS
LMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTVRE
EMKKTVPQCISKSMEPIAGQISNTIATKLTAVEGSLKENITKLVKSKNLTDTIVRATADT
LQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINETFKQGTQEYIQQLETHMKNKKAREQE
GREPLLNQLRQLISTFQSSAEQLPSTIAASVHAEVQHQLHVIVGNMQESILAQVQRVIKG
EVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQAQQTHILQLLQQGHLNQAFQQAL
TAADLNLVLYVCETVDPQQVFGQQPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVM
HLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcagtaaatgagaatccgaggccgttgaattcgtacaacggagacctgaacggg
ctgctggtgcccgagcccgttgtggccggagatggccctgctttggctaagccagcgcat
cgcagcgtctccctgggggtcctgcaggagaagcaagtcatctgcctttccggtgatgac
agctccacttgcatcgtgatatcagcaaaagatgtggagatagtggccagcagtgattcc
agcatcaccagtaaggccagagggagtaacaaggtgaaaatacagcctgttgctagatat
gactgggagcagaaatactactacggtaatctgatagcggtctcaaactcatatctggct
tatgccattagagctgccagcaacggctccgctatggtgagggtgctgagcgtgagcacg
gccgagcgcaccctgctcaaaggattcacgggagccgtggcagacctggcttttgcccat
ctcaactccaaccagctggcctgcctcgatgaggctggcaacctttttgtgtggcgcttg
gccatggataaagagaaaattcaagaggagatcttggtgaacatcaaacgtcctgacaat
acccccttgaatacctctcgaagaatcatctggtgtcctttcatcccagatgataatgag
gagaatggtgaagagggaagtcaaacgttggccttgttgcacgaggacagggcagaggtg
tgggatttagacattattcgaacaaacaacagctcctggccagtggaagtgcctagcatc
aaagaaggcttcattgtagtgaagggtcacagcacgtgcctgagtgagggagctctctct
ccagatggaacggtgttggccacagcaagccatgatggtttcgtcaagttctggcagatc
tatattgaggggcaagatgagccaaggtgtcttcatgagtggaaaccccatgatggtagg
cctctctcctgcctgctcttttgtgacaaccataaaaagcaagacccagaggttcccttc
tggagatttcttatcacaggagcggatcagaatagagagctgaagatgtggtgcactgtg
tcttggacctgtctccagactgtgcgcttttctccagacatcttcagctctatgagtatt
cttcccagcttgaaagtctgcctcgacctctctgctgaatatctgatcctgagtgatgta
cagagaaaggtcttgtatgtgatggagctgctgcagaaccaggaggagggcaaagcctac
ttcagctccatctccgagttcctcctgacccaccctgtcctcagctttggcatccaggca
gtgagccgctgccgcttaaggcacaccgaagtgctccccgcggaggaggaaaatgacaac
ctgagtgtggaaggtgctcagggagctggcgctgtggagtcagccgcgggggtgcttata
aagctcttctgtgtgcacaccaaggccctacaggatgtgcagatcagattccagcctctc
catagtcctgatgtggctgcatccctgccttcccatggctctcatgaagagtttgccttt
ccagaccatatggctgacctgagcacagaagggctgggatctgaaaagggatctgtgcac
ggctctcaaccggacttgcggcgtattgctgacctccctgtacccgcagacttcctttct
ctctcaaatgatgccaagcctaagttgatgactccagatgctttcatgacgccaagcaca
tctcttcaacagatcactgtgtccccaggcagcagcgtcagttccttgactgcagtcaca
gccatgagcagcacttctgtcactgacacctcaatggccaggacgtcagaggacttgaca
gtgagcccgaagatgcagctggacaccagcctcacactgagcagcagcagcagcagtctt
caaaccagtcctaggagccattctgttctgatccccggcctcgctgacaagctaacgccg
aaggctcctgttccagttgcaccaggaaacccttccctagctctggaactgcaggaagtg
gagcccttggtggtgcctcaggcctctcccacgcgcgagcgttcgccggacgtcatttcc
tcggcttccacggccatgtcccaggacatccccgagatcgcgtcggagacgctgcagcgc
agcttcgccgcggcgccgggcctcgccgcggaggtgctggagcccggcctgcacgcggac
accatggcctccgcagcctccgccctgcacttgctctcccccaggaaccggcacaattcc
gaccacagccaccactctttggacatgcctcagatggacgtggacaggctgaacgctccg
tctttgctggagactgctttaactcaggaaaacgcatcttctgacagtgtcgtaggccag
ccctggccagcggctcccgacataaccagagaaactaggaacggcatggcagacagccca
agggatgaggtagaagaaaagcataagagctcttcctaccaccgccacagctaccacctg
ctgcagcacgacagccaggacgccagcgccgagcagagtgaccacgatgatgaagttgca
agtttggcttctacgtcgggtggatttggtgccaaagcgtctacgcagcggctgcctgtg
aaggactggaaagccaaggcatcccctcgggcttccccaaagctcaaacggaagggcaag
aaagatgacggggaggtgaaccagtcacccagatcatctaacaaccaggtgacacccgag
ttccaggatgagctgatgtgtatcctgaggaaccagcagcgggaactctgtgagctgcgt
cagaaccagatggagctgctgcagagactcacagatcacctggatgccatccagagctcc
ctcatgggccacgtggagagggtgatcgactcccagcaggaacaggagcagaggagacta
gacagagcgctaacagaagggcagcagcgcaacgggcaactccaggagcatctttctcag
cagctctcccagtcgctctccactgccgtgtgtaatcgtctggagaggaccgttcgtgaa
gagatgaagaagactgtaccccagtgcatctccaagagcatggaacccattgctggccag
ataagtaacactattgccaccaagctcactgccgttgagggctcgctgaaagagaacatc
accaagctggtgaaatcaaagaaccttacagataccatcgtgagggcaacggctgatacc
ctgcaaggacccatccagtcggcgtacagggaagcgttccagagtgtcgtgttgccagcc
tttgagaagagctgccagtctatgttccagcaaatcaatgaaaccttcaagcagggcacg
caggagtatatccagcagcttgagactcacatgaagaacaagaaagcgcgggaacaggaa
ggccgggagccgctgctgaaccagcttcgccagctcatcagcaccttccagagctccgcg
gagcagctgccctccaccattgcagccagcgtccacgctgaggtgcagcatcagctgcac
gtcattgtgggcaacatgcaggagtctattttggcccaggtgcagagggtcattaaagga
gaggtgagcctggctatgaaggagcagcaggcggccgtcacctccagcattgtccaggcc
atgcgctcggcggcagggactcccatcccctctgctcatctggacttccaggctcagcaa
acccacatcctccagctgctgcagcagggccacctcaaccaagccttccagcaggcccta
acagcagctgatctgaacctggtcctgtacgtctgtgagactgtggatcctcagcaagta
tttggccagcaaccgtgcccgctgtcgcagcctgtgctcctgtctctcatccagcagctc
tcctcagacctgggtactcgtacagaactgaaactgaattaccttgaggaagcagtgatg
cacctggaccaaagcgaccccataacccgagaccacatggggtctgtcatgaaccaggtg
cggcagaagctcttccagttcctgcaggtggaaccccacaacacgctgagcaaacccgcc
cgtcgcctcatgatcatgctgcagggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
