Nothoprocta perdicaria (Chilean tinamou): 112943243
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Entry
112943243 CDS
T07556
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npd03000
]
112943243 (CTCF)
03036 Chromosome and associated proteins [BR:
npd03036
]
112943243 (CTCF)
Transcription factors [BR:
npd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112943243 (CTCF)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112943243 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
112943243
NCBI-ProteinID:
XP_025890167
Ensembl:
ENSNPEG00000006140
UniProt:
A0A8C6Z0R2
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIPPNQADGGEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGSLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGPDGREGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEPEAPAPPPSKKRRGRPPGKT
ATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaggcagttgaagctatcgtggaagaatcggaaacttttattaagggcaaa
gagagaaaaacctaccaaaggcgccgcgaaggtgggcaggaggacgatgcttgtcacatc
ccacccaaccaggcagatgggggcgaagtggttcaggatgtcaacagtggcgtgcagatg
gtcatgatggaacagctggacccaacgctgcttcagatgaagactgaagtcatggaaggc
gcagtgccccaggagacggaggctacggtggatgacacgcagatcatcacgcttcaggtt
gttaatatggaagagcagcctataaatcttggagagcttcagctggtccaagtacccgtg
ccagtgactgtacctgtggccaccacttctgtggaggagctgcagggagcgtatgaaaat
gaggtttccaaaggcagcctgcaggagggagagcccatgatctgtcacactctccctttg
ccagaaggcttccaggtagtgaaagtgggtgcaaacggtgaggtggagacgctggagcaa
ggggagcttcagccccaagaggatcccaattggcaaaaagatccagactatcagccacca
gccaaaaaaacaaagaaaaacaaaaagagtaagctccgctacaccgaggaaggcaaagac
gtggaygtgtctgtgtacgacttcgaagaggagcagcaggagggtttgttgtccgaggtc
aatgctgaaaaggtagtgggcaacatgaagccgcctaaaccaacaaaaatcaaaaagaaa
ggtgtaaagaagacattccagtgcgagctgtgcagttacacttgtccccgtcgttcyaac
ttggaccgccacatgaaaagccacactgatgagaggccacacaagtgccatctctgtggc
agggcttttcggacagtcacgttactgaggaaccacctcaacactcacacaggtactcgc
cctcacaagtgcccagactgcgacatggccttcgtgaccagcggagagctggttcggcat
cgccgctacaaacacacccacgagaaacccttcaagtgttcgatgtgcgactacgctagt
gtggaggttagcaaattgaaacgccacatccgctcccacaccggagagcgtccgttccag
tgcagcttgtgcagctacgccagcagggacacgtacaagctgaagaggcacatgaggacc
cactccggagagaagccatatgaatgttacatctgccatgcccgcttcactcagagtggt
accatgaagatgcacattttacaaaagcatacggagaacgtggccaaatttcactgtcct
cactgtgatactgttatagcaaggaagagtgacctgggcgtccacttgcgaaagcagcat
tcctacatcgagcagggcaagaagtgccgctactgcgacgcggtgttccacgagcgatac
gccctcatccagcatcaaaagtcgcacaagaacgagaagcgcttcaagtgcgaccagtgc
gattacgcgtgcaggcaggagcggcacatgatcatgcataaacggacccacactggagaa
aagccttacgcctgtagccattgtgataaaaccttccgtcaaaagcagctcctcgacatg
cacttcaaacgctaccacgatcccaactttgtccctgccgcctttgtgtgttccaagtgt
gggaaaacgttcactcgcaggaacacaatggccagacacgctgataactgttctggccca
gatggtcgagaaggagagaatggaggagagacaaagaaaggcaaacgtggcagaaagagg
aagatgcgctctaagaaagaagattcctctgatagtgaggaaaatgctgaaccagatttg
gatgataatgaagatgaagaggagacagcagtagaaattgaggccgaaccagaagtggag
ccagaggctcctgcaccacctcctagtaagaaacgaagaggaagaccgcccggcaaaact
gccacccaaccaaaacaatctcagcctgcagcaatcattcaggttgaagaccagaacact
ggtgaaattgaaaatattatagttgaagtaaagaaagaacctgatgcagaaacagtagag
gaggaggaagaagctcagcctgctgtagtggaagctcccaatggagacctcactcctgag
atgattctcagcatgatggaccggtga
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integrated database retrieval system
