Nothoprocta perdicaria (Chilean tinamou): 112943244
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Entry
112943244 CDS
T07556
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npd04812
]
112943244 (KATNB1)
Cytoskeleton proteins [BR:
npd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112943244 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_VPS8
eIF2A
Beta-prop_RIG_1st
RMC1_N
Beta-prop_WDR19_1st
PROPPIN
WDR54
VPS8_N
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_ACSF4
Beta-prop_pof12
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112943244
NCBI-ProteinID:
XP_025890168
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAVSVATKTAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPIESLQINTNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGSCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLNRVTKSGSILHGLIRDDKPLVQPTPAGSSLRRIYDRPSTSCSKPQSRVKHNSESERRS
PSSEDDRDEKESKAEIQNPEDYKEIFQPKNSISRTPPRNNEPFPAPPEDEPAAVKEAAKP
SQTADVQTPLPKQEHSDPIQRPPIAASTPVTRTEPSVIPAARNEPIGLKASDFLPAVKNQ
SQAELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccgtcgccaccaagacggcgtggaagctgcaagagatcacggctcacagc
agcaacgtgtcctcactcgtcctggggaagagctcaggccggctgctggcaactggcgga
gatgactgtcgggtcaacatctggtcggttaacaagcccaactgcatcatgagcttgaca
ggccatactacccccatcgagagcctgcagatcaacaccaacgaggagctcatagtcgca
ggctcccagtcgggctctattcgagtttgggatctggaagctgccaaaattcttcggacr
ttgctgggtcacaaggcaaatatctgcagcctcgatttccatccttttggaagctttgtg
gcatctggttctctggacacaaacattaagctctgggatgtaagaagaaaaggctgcgtc
ttcagatacaagggtcacacccaagccgttaggtgtctccggtttagtcctgatgggaaa
tggttagcctctgctgctgatgatcacactgtaaagctgtgggatctggctgctgggaag
ataatgtttgaatttacaggacatactggcccagtaaatgtcgttgagttccatcccaac
gaataccttctggcttctggcagctctgacaggactgtccgattctgggacttggagaag
tttcaagttgtgagctgcattgaagaggaggccacaccagtcaggtgtgtgctcttcaac
cccgatggcagctgcttgtatagtggcttccaggattccctgcgtgtgtacggctgggag
ccagaacgctgttttgatgtggtcttggtgaactggggaaaagtagctgacttatctatc
tgcaacaaccagctgataggagtttcctttgcacaaagcaccgtctcctctttcgttgtg
gatctcaacagagtcacaaagtcaggttccattcttcatgggctcatcagagatgacaag
cctcttgttcagcctacgcctgcagggtcctcgcttcgtcgcatctatgacaggccatca
actagctgcagcaagccacagagcagggtgaaacacaactcggagagcgagagacgcagt
cccagcagtgaagatgaccgggacgagaaggaatcaaaggctgaaatccagaacccggag
gactacaaagagatcttccagcccaagaactccatctctcgaactcctccacgaaacaat
gagcccttcccagcgcctcctgaggatgagcctgcagctgtaaaggaagcagcgaagccc
agccaaactgcggatgtccagaccccattgccaaagcaggaacactctgacccaattcag
aggccaccaattgccgcctcaactcctgtcacaagaacggagccatcggtgattcctgca
gcaaggaatgagcccattggcctgaaggcctccgactttctacccgctgtgaagaaccaa
agccaggctgagctggtggatgaggaggccatgtcccagatcaggaagggccacgagacc
atgtgcgtggtgctcaccagtcgccacaagaacctggacactgtgcgggctgtatggagc
actggtgacatcaagacctctgtagactccgctgtggccatcaatgatctctctgttgtt
gtcgacctcttgaatattgtcaaccagaaagcgtctctctggaagttggatctgtgcacc
atagtcctgccacagatagaaaaactactccaaagtaaatatgaaagttatgtgcagact
ggctgtacctctttaaagctcattctgcagcgattcctgccgctgatcacagacatcctt
gctgctccaccctccgttggggtggacatcaccagagaggaaaggctccataaatgcaag
ctgtgctacaagcagctcaaaaacatcagcaacattgtcaagaacaagtccgggctcagc
ggccgccatggtagtgccttccgggaactgcatctgctcatggctgtcttggagtga
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