Nothoprocta perdicaria (Chilean tinamou): 112943274
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Entry
112943274 CDS
T07556
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112943274 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112943274 (CNOT1)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112943274 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112943274 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
112943274
NCBI-ProteinID:
XP_025890199
Ensembl:
ENSNPEG00000007336
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLQIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSSIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaatcggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacccaatttttgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccattgcac
tatcagaagagtctgaagccttcaccccatttatttgcccagttgagtaaagtcatcaag
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggctttgctgcccagttcatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctctttgggcagaagggagcctttggggtaggacag
gaacagatcgacgctttcctcaaaacattacgtagagattttccccaggagcgttgcccc
gtggtgcttgcaccacttctctaccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagcgaaaaccatgatggagagttctctggcagacttcatgcaa
gaagttggctatggcttttgtacgagygtggaagagtgtcgcaacataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggtcgccagggttttggggatgatggctcggact
cattcaggattgacggacggaattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgacggagcacaagcccatacctggaatgtggaggtc
ttgattgatgttcttaaagagctgaaccctagtttggacttcaaagtagtaacctatgaa
ctggaccatccaggatttcagattcgggacagcaagggcttgcagattgtggtatttggc
atccagagaggattaggcatggaagtctttccagttaacgccatatacagaccttggaaa
cacgcggagggccagctctccttcattcagcattccctcatcaaccctgacatcttctgt
tttgctgactacccatgtcatactgttgccacagacatcctgaaagctccaccagaggat
gacaatcgagaaattgcaacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttccaatcaagcactgc
ccagatatgttggtattggccttattgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcaatccgccagcttatcatgcat
gcaatggcagagtggtacatgagaggggagcagtatgaccaggcaaaactgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgcatgactttctta
aagaggagatgtccatccatcctgggtggcctggctccagaaaaagatcagcccaaaagt
gctcagcttcctccggagaccttggcgacgatgctggcttgtctccaggcctgtgctggg
agcgtttctcaggagctgtcagagaccatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggcaaggcagccaccgcctggagtcatgcccaagggccggccgcccagcgct
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcaggaatggcatccctt
agcttgggcggctccgctgctccccacacccagagcatgcagggcttccccccaaacctg
ggctccgcgttcagcacgccgcagtcgccagcaaaagcctttccccccctctccacccag
aaccagacaacgggtttcagcagcatcggaggactctcttcacaacttccagtaggtggt
ctgactacgggtagcctgactggcataggaactggggcccttggcctccctgcagtgaac
aacgaccccttcgtgcaaaggaagctcagcacgtctggactgaaccagcctacgttccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggccaacagctactttcaacgtatttataaccatccacca
catccgaccatgtctgtagatgaggtgttagagatgctacagagatttaaggattccaac
attaaacgagaacgagaagtgtttaattgtatgctgaggaacttgtttgaggaatatcgt
tttttcccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctacgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtatcgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcatcacttgcaggagtacatagagtatggacagcaatccagagat
cctcccgtgaagatgcagggctcaatcaccacccctggcagtattgcacttgcccaggca
caggcccaggcccaagtcccagcaaaagctcctcttgctggccaagtcagcactatagtg
accacctcgaccaccaccactgtggcaaaaaccatcaccatcactcgtccaacgggagtc
agcttcaagaaggatgtgccaccttccatcaatactactaacattgatacgctgctagta
gcaacagatcaaactgagagaattgtggagcctccagagaatgttcaagagaagattgct
ttcatcttcaataatctgtctcagtcaaatatgacacaaaaggtggaggagctgaaggaa
acagtgaaagaagagttcatgccttgggtatcgcagtatcttgtcatgaaaagagtcagt
atcgagccaaacttccacagcttatattccaacttcctggacactcttaagaatccggaa
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctgctgacgtcagat
aaagctgcagccaacttctcagaccgttccttgctaaagaatctcgggcattggctggga
atgattacactggctaaaaacaagcccatcttgcacacggatttggatgtgaaatcgctg
cttctggaagcatatgttaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagtcttggaatccagtgtcaggagcgtggtgttcaggcctccaaatccctggacaatg
gccattatgaatgttttagccgagctgcatcaagaacatgatctaaaattgaatctgaaa
tttgagattgaggtgctctgcaagaacctggcgctagatatcaatgagctaaaacctggg
agtctcctgaaagataaggatcggttgaaaaatctagatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgcacagccacggttcctccacagcctcagtacagctaccac
gacatcaatgtctactctttgggagggttggcaccacacattaccctaaacccaacgatt
cccctgtttcaggcccacccgcagctgaagcagtgcgtgcggcaggctatcgagcgcgcc
gtgcaggagctggtccatccggtggtggatcggtccatcaagattgccatgaccacctgc
gagcagatcgtcaggaaggactttgcgctggattcggaggagtcccggatgcgcgtggcc
gcgcatcacatgatgcggaacctcactgccggcatggccatgattacttgccgggagccc
ttgctgatgagcatagctaccaacttgaagaatagctttgctactgctctgagggcagct
tccccacagcagagggacatgatggagcaagcagctgcccagctagcacaggataactgt
gagctcgcctgctgctttattcagaagacagctgtggaaaaggcaggccctgaaatggat
aagaggctagcgactgaatttgagctcagaaagcatgctagacaagagggtcgtcgatac
tgtgatcctgttgtattaacttaccaagcagaacggatgccagaacaaatcaggttgaag
gttggcggtgtggatccgaaacagctggctgtttacgaagagttcgctcgcaatgtccct
ggcttcctgcctaccaatgatttaactcagcccacgggattcttggctcagcccatgaag
caagcctgggctacggatgatgtagctcagatctatgacaaatgtatgacagaactggaa
cagcacctgcagtccatcccacatacgctggccatgaatcctcaagctcaagctttgcgc
agcctcctggaggctgtggtagtggctcgtaactcacgtgatgctattgctgctctgggg
ctgctgcagaaggctgtcgagggcttgctggatgccacaagcggggcagatgccgacctc
ctcctccgctaccgtgagtgtcacctgcttgtgctgaaggctctgcaggatggccgcgct
tacggctctccgtggtgtaacaaacaaattaccaggtgcctgattgaatgcagagatgag
tacaagtacaatgtggaagcagtggagttgctaatccgcaatcaccttgttaacatgcag
cagtatgatcttcacttggctcagtcaatggagaatggcttgaactacatggcagtggca
tttgccatgcagttggtaaagatcctcttggtggatgagagaagtgttgcccacgtaaca
gaggcagatctgtttcacaccattgagacgctcatgaggattaatgctcactccagagga
aatgccccagaaggattaccccagttgatggaagtggtccgatcaaactatgaagccatg
attgaccgtgctcatggaggtcccaactttatgatgcattctggaatatcgcaagcctct
gagtatgatgacccaccaggtctgagggagaaggcagaatatctactgagggaatgggtg
aacctctaccattcagctgcagcaggccgcgacagtaccaaagctttctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaaaacagatgacctgatcactcgattttttcgt
ctttgcactgaaatgtgtgtggaaatcagctatcgggcgcaggccgaacaacagcataac
cctgctgccaaccccactatgatccgagccaagtgctaccacaatctggatgcctttgtg
cgacttattgcactgctggtgaagcactcgggggaggcaaccaacacagttacgaagatc
aacctcctgaacaaggttcttgggattgtggtgggagtccttctgcaggaccacgatgtc
cggcagagtgagtttcagcagcttccttaccatcgcatattcatcatgttgctgttggaa
ttaaatgctcctgagcacgtgctggagaccatcaacttccagaccctcacagccttctgt
aacacatttcacatcctgaggcctacaaaagctccaggctttgtttatgcctggctggaa
ctcatctcccatcggatatttattgcaagaatgctggcacatacaccacagcaaaagggt
tggcctatgtacgcccagttactgattgatcttttcaagtacttggctccttttcttaga
aatgtggaactcaccaaacctatgcaaattctttacaagggtaccttgcgagtgttgctg
gtcttgttgcatgatttcccagaatttctttgtgactaccactatgggttctgtgatgtg
atcccccctaactgtatccagctaaggaaccttatcctgagtgccttcccacggaacatg
cggcttccagatcctttcacccccaatctgaaggtggacatgctgagtgagattaatatt
gctccgcggatccttaccaatttcactggagtgatgccacctcagttcaagaaagatttg
gattcctatctcaaaacacgttctcctgtcactttcttgtctgatctgcgcagcaacctg
caggtgtccaatgaacctggcaaccgctacaacatccagctgatcaatgccctggtgctc
tacgtcggtactcaagctattgcgcacatccacaacaaaggcagcacrccctccatgagc
accatcacccactcggctcacatggacatcttccagaatttggctgtagatctggacacc
gaaggtcggtaccttttcttgaacgcaattgccaaccagctgcgctatcccaacagtcac
acccactacttcagctgcaccatgctctacctgtttgctgaggccaacaccgaggctatc
caggagcagatcactagggttctcttggaacgactcattgtaaataggcctcatccctgg
ggtctccttattaccttcatcgagctgataaaaaatccagcgtttaagttctggaaccat
gaatttgttcactgtgctccagagattgaaaagttgttccagtcggttgcgcagtgctgc
atggggcagaagcaggcccagcaagtcatggaaggcaccggcgccagttag
DBGET
integrated database retrieval system
