Nothoprocta perdicaria (Chilean tinamou): 112943334
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Entry
112943334 CDS
T07556
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112943334 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112943334 (TGFBRAP1)
Membrane trafficking [BR:
npd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112943334 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
Motif
Other DBs
NCBI-GeneID:
112943334
NCBI-ProteinID:
XP_025890258
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MSVKAFKLVCAVEREMLMGDKAHINIECIECCGKNLYIGTNDCFIYHFLLDEKISTAGKT
TFAATKQLHKYLGFKKSVSELKAASALTRLLVLCDNTITLVNMLNLEPVPTGARIKGAVT
FTLNENPVSTDPFCVEVCIISVKRRTIQMFVVFEDRVQIVKEVFTPEQPYAVAVDGHYLC
LALTTQYIILNYDTGSSQDLFPYCSDERRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDEEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPPSSSFIRSHPPLHEYADLNQLTQGDQEKM
AKCKRFLMSYLNEVRSTDVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVNGDIQDATRSDLYEYVVDFLTFCSDQEL
VWKYSEWVLQKNEEVGVQIFTKRPLEEQEKNNMNPDDIISCLNKYPKSLVKYLEHLVLER
KIEKEKYHTHLAVLYLEAILHLKSVATDNCTETTELLLKLRSLLQKSDLYRIHFILEKVR
GTDLHMESAILYGKLEEHEKALHILVHELRDFGAAREYCAWSAASRGPRYRRRLFHMLLG
AYLGGSGGAASDGALVAAAVDLLNGHAAEFDAARVLQLLPESWSVQLLSPFLAGAVRQSV
HARRMSRVALGLAHAENLIYKHEKVKQRGPPILLSDKAACQVCQKPFCEPVFVRDPHGAV
VHTHCAASRHLNSNVAPCSSSSSNQT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcaaggctttcaagctcgtctgcgctgtggagcgggagatgctgatgggagac
aaagctcacatcaacatcgagtgcattgagtgctgtgggaagaacctctacattggaacc
aatgactgctttatctaccactttctcttggacgaaaagatatcaacagctggaaaaaca
actttcgctgctaccaagcagctgcacaaatacctgggcttcaagaagtccgtgagcgag
ctaaaagcagcgtccgccctcaccaggctgctcgtgctctgcgacaacacgataacacta
gtgaacatgctgaacttggaacccgtgcccacgggcgccaggatcaaaggagccgtgacc
ttcacgctgaacgagaaccccgtgagcaccgaccccttctgcgtcgaggtctgcatcatc
tccgtcaagcgccgcaccatccagatgtttgtggtgtttgaagaccgagtgcagatagtg
aaggaagtgttcaccccggagcagccctacgccgtggctgtagatgggcactatttgtgt
ctcgcccttaccacgcaatatatcatattgaattatgacactggcagctcccaggatctg
ttcccgtactgcagtgatgagaggcggccgattgtgaagaggataggcaggcaggagttc
ctgctcgccgggcctggagggctagggatgtttgcgaccgtggatggcatttcccagcga
gcccccgtgcactggtcggagaacgtgatcggagcagcgctctgttttccttacgtggtc
gctctggatgaggagttcatcaccgtgcacagcatgctggaccagcagcagaagcaaacc
ctgcccttcaaagaaggtcacattctgcaggactttgaaggcagggtaattgtggctact
aataagggtgtatatattttggtgccgctccctttggaaaaacagattcaggatcttcta
gccagccaccgagtggaagaagccctcgtccttgcaaaaggagctcgaaggaatatccca
aaagagaagtttcaggtaatgtacaaacgaatcctacagcaagcgggttttattcagttt
gcacagcttcagttccttgaagcaaaagagctcttcagaagcggccagctcgacgtccgg
gagctcatctctctctaccccttcctgttgcctccttcctcttcatttatacggtctcac
ccccctctgcacgagtacgctgacctaaaccagctgacccaaggcgaccaggagaagatg
gccaagtgcaaacggttcctcatgagctacctgaacgaagtgcgcagcaccgacgtggcc
aacggctacaaggaggacatcgacacggccctgctcaagctgtacgcggaggcgaaccac
gagagcctcctggatctgctggtctccgagaacttctgccttctcacagacagcgccgcc
tggctggaaaaacacaagaagtattttgcccttggtctcctgtatcattacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagtgaatggggacattcaagacgccacg
cgttcggatctctatgagtacgtggtggacttcctcacgttctgctcggaccaggagctg
gtgtggaagtactccgagtgggttttgcagaaaaatgaagaggttggagtgcagattttc
actaaaaggcctttggaggagcaggaaaagaacaacatgaatccagatgatatcatmagt
tgccttaacaaataccctaagtcacttgttaaatatctagaacatttagtgttggaaaga
aaaatagagaaggagaagtaccatacccatctagctgtcctgtacctggaagcaatactg
cacttgaaatcagtggcgacagataattgtacagaaaccaccgagctgctgcttaaactg
cgcagtcttcttcagaaatctgatctctatagaattcactttattttggaaaaagtccgg
ggcacggatctccacatggaaagcgccattctgtacgggaagctggaggagcacgagaag
gccctgcacatcctggtgcacgagctgagggactttggsgccgcgcgggagtactgcgcg
tggagcgccgccagcagaggaccccgctaccgccgccggctcttccacatgctcctcggc
gcctacctgggcggcagcggcggcgccgcctcggacggcgccctcgtggcggccgccgtg
gacctcctgaacggccacgcggccgagttcgacgccgcgcgggtcctgcagctgctgccc
gagagctggtccgtgcagctgctctcgcccttcctggccggcgccgtgaggcagagcgtc
cacgcgaggaggatgagccgcgtcgcgctggggctggcgcacgccgagaacctcatctac
aagcacgagaaggttaagcagagaggaccccccattcttctgtcggataaggcggcctgc
caggtgtgccagaagcccttctgcgagcccgtgtttgtgagggacccgcacggggccgtg
gtccacacgcactgcgctgccagcaggcacctcaactcaaacgtggctccttgctcttcc
agctccagcaatcagacttga
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