Nothoprocta perdicaria (Chilean tinamou): 112943401
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Entry
112943401 CDS
T07556
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03250
Viral life cycle - HIV-1
npd03272
Virion - Hepatitis viruses
npd04144
Endocytosis
npd04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112943401 (VPS4B)
03272 Virion - Hepatitis viruses
112943401 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112943401 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
112943401 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112943401 (VPS4B)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112943401 (VPS4B)
Membrane trafficking [BR:
npd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
112943401 (VPS4B)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
Check point factors
Other check point factors
112943401 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_5
AAA_14
AAA_22
RuvB_N
IstB_IS21
AAA_25
DUF815
AAA_18
AAA_2
AAA_17
RNA_helicase
NPHP3_N
nSTAND3
AAA_33
PhoH
AAA_24
Dzip-like_N
USP8_dimer
ResIII
Mg_chelatase
AAA_28
DUF5113
AAA_7
Parvo_NS1
NACHT
Tae4
bpMoxR
Sigma54_activat
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
112943401
NCBI-ProteinID:
XP_025890335
Ensembl:
ENSNPEG00000011009
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MASSSGTLQKAKDLASKAAQEDKAGNYEEAFRLYQHAVQYLLHVVKYEAQNDKAKQSIRM
KCTEYLDRAEKLKEYLKKKEKSAPKPVKESGPTDGKGNDSDGEGESEDPEKKKLQNQLQG
AIVMERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSY
LAKAVATEANNSTFFSVSSSDLVSKWLGESERLVKNLFQLARENKPSIIFIDEIDSLCGS
RSENESEAARRIKTEFLVQMQGVGVDNEGILVLGATNIPWVLDSAIRRRFEKRIYIPLPE
DHARAAMFKLHLGSTPNLLTESDYRELGKRTDGYSGADISIIVRDALMQPVRKVQSATHF
KKVKGPSVSNPNIMVDLFTPCSPGDPEAIEMTWMEVPGDKLLEPQVSMADMLRSLASTKP
TVNEQDLEKLKKFTEDFGQEG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcctccggcacgctgcagaaagcaaaagaccttgctagcaaggcagcacaa
gaagataaagcaggaaactatgaggaagcattccgcttgtaccagcatgctgtgcagtat
cttctccatgttgttaaatatgaagcacagaacgataaagcaaaacagagcattagaatg
aaatgtacggagtacctggacagagcagaaaagctgaaagaatatctgaaaaagaaagaa
aaatctgcgccaaagccagttaaagagagtggtcctactgatggaaaagggaatgacagt
gatggggaaggagagtcagaagatcctgaaaaaaagaagctacagaatcaactccaaggt
gcaattgttatggagcgaccaaatgtaaagtggagtgacgttgctggtcttgaaggtgcc
aaagaagcacttaaagaagcagtgatcctgcccattaaatttcctcatctctttacagga
aagagaacaccttggagaggtattcttctgtttggacctccaggaacaggaaagtcctat
ttagcaaaagctgtggcaacagaagcaaataattctacattcttctcagtatcttcctct
gatctagtctcaaagtggttaggagagagtgaaagattagtgaaaaacttgttccagctt
gccagagaaaacaaaccttctattatcttcattgatgagatagattccctctgtgggtca
agaagtgaaaatgagagcgaggctgctagacgaattaaaacagagtttctagtccagatg
caaggggttggtgttgacaacgaaggaatcttggtcttgggagcaacaaacataccctgg
gttttggactctgctatcaggaggaggtttgagaagcgtatttacattcctttacccgaa
gaccatgccagggctgcgatgtttaaacttcaccttgggtcaactccaaatctcctaaca
gaatcggattatcgagagctcggaaagagaactgatggctactctggtgccgatattagc
atcattgtacgtgatgcactgatgcagcctgttagaaaagtgcaatcagctactcacttt
aaaaaagtaaaaggaccatcagtgtctaatccaaacatcatggtagacttgttcacccct
tgctctccaggggatcccgaagccatagaaatgacatggatggaggtcccgggtgataaa
ttactggagccccaggtttccatggctgatatgctcaggtcgctcgctagcacaaaacca
acagttaatgaacaagacctggagaagttaaagaagtttacagaagattttggtcaggaa
ggttaa
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