Nothoprocta perdicaria (Chilean tinamou): 112943441
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Entry
112943441 CDS
T07556
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112943441 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
npd04990
]
112943441 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
npd04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112943441 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
112943441
NCBI-ProteinID:
XP_025890377
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MGTGDYXCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRNKSKAAKAGLREGDEVVSINGKP
CGDLTYAEVIVLMESLTDVLQMLIKRSSSGINEALSAERENGKHDNIKTEDYRESATLQI
NTVKETPHTEFCITEIYSETHQGAEKSNIKFSEMKQETTQSHKITPKVTGTSKVLVTDEA
AFRGKIEERRPGTMVELQLSLSHDRHKGTNAPAMTLLGAEKCFPSETGPSVKQDGTSPVI
AIPLGVKEGNIQWSSKVVQVSSGKEIKTIQGAAPSLPRVEVILDCSDRQKEASRSLAERG
CVDSQVEGGQSEAPPSLLSLAISSEGTEQGEDDQNSERDHSRPLKHRARHARLRRSESLS
EKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERYEDEGE
EGEGEEGDKENTFEVSLLATSESEIDEDFFSEIDKEGKIVTFDWDSGLLEVEKKAKSGDE
MQTLPETTGKGALMFARRRQRMDQITAEQEEMKARTGHAEERSEATMSESFQKVSCAAYQ
TKEEEMSSRQTSVSKSYLDVSPNHSKMVQQNGFGLAPDSAFSFQSSEVQKAASLNKTAKP
FPAGVQNRAAAPFSPTRNIASPLSDIPAPPPYAAVSPPPEVLYRPVSAPVALRAAPVSWS
STEPPEHIATRDERIAVPAKRTGILQEAKRRSTTKPMFTFKESPKVSPNPALLSLVHNAE
GKRGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKTPPPVAPKPSVKVSPAADTPISPV
WSPPAVASIKAPSFPAPVSPQAAYPAPLKSPQYPHSPPARPPSTLNLAGPFKGPQATIAS
PSNTPKATPTTPSAGGKKPTFEIPPAMSGKGAQLFARRQSRMEKYVVDSETVQANIARAP
SPTPSLPASWKYSSNVRAPPPVAYNPILCPSYPPAATKPSSQSAAATKNTKRKPKKVLNA
LDVMKHQPYQLDASLFTFQPPSSTKESLGIKQASKLSASKQGLPLRPLSAGSPTNVRASS
VYSVPAYGSQPSFQSNASTPVNESFSPTGYSAFSRPETITSSLFTAPRPKFSAKKVGVTA
QGRSSGRSLSLPGRPSSVISRAISPTSPLTFQPAPDYFSKPGTAADRPGKRPTPWEAAAK
SPLGLVDEAFAPQNIEESIAANVVSAARRKTFPEPXDEWQQGASAEAPVASGGAALPGGR
QLGMIVPPHKGTVLAPSAGGSQPQYAYFSQQSRTDPDTMSMDSRSDYYL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattatayctgcattgctatgagcggaggggcgccttggggctttaga
ttgcaaggtggcaaggagcaaaagcagcctttacaaatcgccaaggttcgaaacaagagc
aaggctgctaaggccgggctacgtgagggggatgaggtggtgtctatcaatggcaaaccc
tgcggagacttaacctacgctgaagttattgttctaatggaaagcttgactgatgtcctg
cagatgcttatcaagagatcctccagtggaataaatgaagccttgagcgctgaaagagaa
aatggaaagcacgataacataaaaactgaggactatagggagagtgccacactgcaaatt
aacacagtcaaagaaacaccccacacagaattctgcatcacagagatatacagtgagact
caccaaggagcagagaaaagcaacataaaattttctgaaatgaaacaagagaccacacag
agccacaaaattactcctaaagtgacaggaacctccaaagtgctggtgacagatgaggct
gctttcagagggaagatagaagaaagaaggccaggcactatggttgagctgcagttgtcc
ctctcacatgacaggcacaagggcaccaatgctcctgctatgactctcttaggggcagaa
aaatgcttcccttcagaaacaggacccagtgtaaaacaggatgggactagccctgtaatt
gcaattcccctgggtgtgaaagagggcaacatccagtggtcaagcaaagtagtccaggtt
tctagtggcaaagagatcaagacgatccaaggtgcagctccatctctccccagggtggag
gtgatcctagactgttcagacaggcagaaggaagcatccaggtctctagcagaaaggggg
tgtgttgattctcaagtggaaggagggcagtcagaagcacctccttccctcctctccctt
gcaatctcatcagaaggcacagagcagggagaagacgaccagaactcggaaagggatcac
agcagacctctcaagcacagagcaaggcacgcaagactccggcgaagtgagagcctgtct
gaaaagcaggtcaaagaagctaaatccaaatgtaaaagtattgcattgctgctgacggca
gctcccaaccccaattccaagggggtgttgatgttcaagaagcgtcgccaaagagcgagg
aaatacactctggtcagctacggcactggggagctcgaacgttacgaagacgaaggtgaa
gaaggggaaggtgaagagggtgacaaagaaaacacttttgaagtgagtttgcttgcaaca
agcgagtcagaaatagatgaagatttcttctctgagattgacaaagaaggcaagattgtg
acatttgactgggacagtggtctacttgaagttgaaaagaaggcaaaaagtggagacgag
atgcagacgcttccagagaccacgggcaaaggggccctcatgtttgccaggaggcggcag
aggatggatcagattactgctgagcaagaggagatgaaggcacgcaccgggcacgctgag
gaacgcagcgaagccaccatgtcagaaagcttccagaaagtgagctgtgcagcctatcag
acaaaagaggaagaaatgtcaagcaggcagacctctgtgagcaaragctacctagatgtg
agcccgaatcacagtaaaatggtacaacagaatggctttgggttggcgccagactcagct
ttctcttttcagagctctgaagttcagaaagctgcctcgctgaataaaacagctaagccc
ttccctgccggggtccagaaccgagcagctgcaccattttcacccacaagaaatatagcg
agtcctctctctgacataccagccccacctccctacgccgctgtcagcccccctcctgag
gtcttatacaggccagtatctgctcccgtagccctcagggctgcgccagtctcgtggtcc
tccacagagccacccgaacacatagcaacccgcgacgaacggatcgcagtgccagccaag
agaacagggatactgcaagaggcaaagagaagaagcactacaaaaccaatgttcaccttc
aaagaatcacccaaagtcagtcctaatcctgccctgttatcccttgtacacaatgcagaa
ggtaaacgaggtactggggctggctttgagtcaggacccgaggaagactacctcagtttg
ggagcagaagcttgcaatttcatgcagactcaagcatctaaacaaaagacccctcctcct
gttgctccaaagccctcagtcaaggtctctcctgctgccgatactccaatttcaccagtc
tggtcacctccagctgtagcttctatcaaggctccttccttcccggctccagtctcacct
caggcagcatatcctgcaccactcaaatccccacagtatccccattctcctccagcacgt
cccccaagtactcttaacctagccggtccttttaaagggcctcaggcaaccatagcaagt
ccaagcaacacacctaaggcaacaccaaccacaccaagtgctggaggaaagaagccgacc
tttgagataccgccagctatgagtggaaaaggagcacagttatttgccagaaggcagtct
cgaatggagaagtacgtcgtagattcagagactgtgcaagcaaacatagcacgagcccca
tccccgactccatctttaccagcttcttggaaatactcatctaacgttcgagcaccgccg
cctgttgcttacaaccccattctctgcccatcttatcctcctgctgctaccaagccttcc
tctcaatctgctgctgctaccaaaaatactaaaagaaaacctaagaaggttctcaatgct
ttggatgttatgaagcatcagccttaccaacttgatgcatctttatttacttttcaacct
ccatccagtactaaggaaagcctagggattaagcaggcatcaaagctgtctgcttcaaaa
caaggtctaccattaagaccactcagtgctggctctcctactaatgtccgggcatcttca
gtctactccgtaccagcctatggttcacaaccttcgttccagtcgaacgcctctacccca
gtaaatgaatcattttcacctacaggttactctgcattttctaggccagaaaccatcaca
tcctctttgtttactgctccgaggccaaaattttctgcaaagaaagttggcgtcactgca
cagggaagaagcagtggacgctcattatcacttcctgggagaccttcttcagtcatttct
cgagccatatccccaacatctcctcttacctttcagcctgctcctgattactttagcaag
ccaggtacagcagctgacaggcctggcaagagacccactccctgggaagcagcagctaaa
tccccccttggcctagtggatgaagcttttgcacctcagaatattgaagaatctattgca
gctaacgtagtgtcagcagctcgcaggaaaacatttcctgagccascagatgaatggcaa
caaggagcttctgcagaggctccggtcgcaagcggcggtgcggccttacctgggggacgg
cagctgggtatgatcgtcccgccccacaaaggcaccgtgttggccccaagcgccggtggc
tctcagccgcagtacgcttacttcagccagcagtccagaacagatcccgataccatgtcc
atggattcccggtctgactattacttgtga
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