Nothoprocta perdicaria (Chilean tinamou): 112943546
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Entry
112943546 CDS
T07556
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112943546 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npd04121
]
112943546 (RAG1)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112943546 (RAG1)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112943546 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112943546
NCBI-ProteinID:
XP_025890540
Ensembl:
ENSNPEG00000011405
UniProt:
A0A8C6ZGD1
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MSAVSKMDLPEEIQHPYTKFSEWKFKLFKLRSFEKTPSDDTQCINKEEVEEIASLDKNVI
VHKDETIPREEKSIWTKPDLTGHRQALEKDANDTKTQANEVHQNNLKQLCRICGVSLKAD
CQKRSHPVHGPVDQETLWLLRKKEKKATSWPDLIAKVFKIDVRGDIDTVHPTQFCHNCWS
IIHRKFSNALCEVYFPRNTTMEWQPHSPNCAVCHPTCRGVKRKSQTXSVQLGKRVKTIAE
RTRVSKGLMNQAQLKNKTLMKEILSCSKIHLSTKLLAVDYPADFTKSISCQICEHILADP
VETTCRHLFCRTCILKCIKVMGSYCPSCWYPCFPTDLVSPVKSFLNILDSLGIRCPIKEC
DEEIMLGKYGQHLSNHKLMKERELYSHINKGGRPRQHLLSLTRRAQKHRLRELKCQVKAF
AEKEEGGDIKAVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFLSC
SQYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWRPPLKNVSTNTEVGIIDGL
SGLPLSIDDYPVDTIAKRFRYDAALVSALMDMEEDILEGMKAKKLDDYLHGPFTVVLKES
CDGMGDVSEKHGSGPALPEKAVRFSFTIMNIAIVHGNENIRIFEEAKPNSELCCKPLCLM
LADESDHETLTAILSPLIAEREAMKTSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGL
EASGSTYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVDELRDRVKG
VSAKPFIETVPSIDALHCDIGNATEFYRIFQLEIGEVYKKPDVSKEERKRWQLTLDKHLR
KKMNLKPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALRELMDLYLKMKPVWRSSCP
AKECPDLLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWAS
EGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSHGFTVDP
EDSLGDSLPLEGSLESNESVEF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtatcaaaaatggacttgcctgaagaaattcagcatccatataccaaattt
tctgagtggaaattcaagctgtttaaactacgatcatttgagaaaacaccttctgatgac
acccaatgcataaataaggaggaagtagaagagatagcttctttggataaaaaygtgata
gtacataaagatgaaacaattccaagagaagaaaagtccatttggacaaagccagattta
actggccacaggcaggcacttgagaaagatgccaatgacacaaaaacacaagccaatgaa
gttcatcagaataatctgaagcaactttgtcgcatctgtggagtatcacttaaagcagat
tgccaaaaaagaagtcatccggtacatgggccagtggaccaagaaaccctatggcttctg
agaaagaaagagaaaaaagcaacctcctggccagaccttattgctaaggtttttaagatt
gatgtgcgaggggatattgacacagtacatcccactcaattttgtcataattgctggagt
attatccatagaaaatttagtaatgccctgtgtgaagtatatttccccaggaacaccacg
atggagtggcagccccattccccaaattgtgccgtgtgccatcctacctgccggggtgtc
aagagaaaaagccaaacayccagtgtacagcttggcaaacgggtgaagaccattgcagaa
cgcactcgagtaagcaaaggcctcatgaaccaagcacaactgaaaaacaaaaccttaatg
aaagagattctcagttgtagcaagatacatctcagcaccaagctccttgcagttgactac
ccagcagatttcactaaatccatttcttgccagatttgtgagcacattttggcagatcca
gtggaaacaacatgtagacacttgttttgccgaacttgcatccttaaatgtatcaaggtt
atgggcagctattgtccttcctgctggtatccttgctttcccactgatctggtaagccca
gtgaaatctttcctcaacatccttgatagcctgggaataagatgccctataaaggaatgt
gatgaagagattatgctgggtaaatatggccagcacctctccaaccataagttgatgaag
gagcgagaactttacagtcatataaataaaggtggccgaccaaggcaacatcttctatct
ctgaccaggagagctcaaaagcatcgtttgagagaattgaaatgtcaagtcaaggctttt
gctgagaaagaagagggaggcgatataaaggctgtgtgcatgactttgttcctgctggcc
ttaagagcaaaaaatgaacacagacaagcagatgaactggaagctataatgcaagggagg
ggatctggacttcaccctgctgtctgcttggcaatccgagtcaacacatttcttagctgt
agccaatatcataaaatgtatagaactgttaaagctgtmactgggaggcagatcttccag
ccactgcatgctcttcgcactgctgagaaagccctcctacccggttatcatccatttgag
tggagacctcccttgaaaaacgtatccactaacacagaagtgggtattatcgatggacta
tcagggctgccactctcaattgatgactacccagtggacacaattgcaaagagatttcga
tatgatgcagccttggtttctgccttgatggacatggaggaagacatcttggaaggcatg
aaagcaaaaaaattggatgactatctacatggtcctttcactgtggtgctaaaagagtcc
tgtgatggaatgggagatgttagcgagaagcatggaagtgggccagctcttccagagaag
gctgttcgcttttctttcacaatcatgaacattgctatagtccatgggaatgaaaayata
aggatctttgaggaggcaaagcccaattcagagctgtgttgcaagcctttgtgccttatg
ctggctgatgaatcggatcatgaaactcttacagcaatcctgagtcctctcatagcagaa
agagaggctatgaaaaccagtgagctgctgcttgaaatgggaggcatcctgagaacgttc
aaattcatttttaggggtacaggatatgatgagaaacttgtccgggaagtggaagggctg
gaagcctctggttccacttacatctgtactctctgtgacgccacacgcctggaggcatcc
cagaacttggttttccactccataacacggagccatgctgagaatttggagcggtatgaa
gtatggaggtccaacccatatcatgagtctgttgatgaactccgtgacagagtgaagggc
gtttcagccaaaccttttattgagacagttccctccatagatgcgttgcattgcgacatc
ggcaatgcaaccgaattctacaggattttccagctggaaataggtgaagtttataagaaa
cctgatgtgtcgaaagaagagaggaagcgatggcaactgactcttgacaaacacctcagg
aagaagatgaacctaaagcctatgatgagaatgagcggaaattttgccagaaagctcatg
tccaaagagacagtagaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagcc
ctgagagaactgatggacctttacctgaaaatgaagccagtatggcgatcttcatgtcct
gccaaggagtgtccagatctgctctgtcagtatagctacaattcacagcgttttgctgag
ctcctatctacaaaattcaagtacagatatgaaggcaagattacaaattacttccacaaa
acccttgcccatgttcctgaaatcattgaaagagatggatccattggggcctgggcaagt
gaaggaaatgagtctggaaacaaactgtttaggcggttccgaaaaatgaatgccaggcag
tccaaatgctatgaaatggaggatgtcttgaagcatcactggctatacacctctaagtac
ctccagaaattcatgaatgcgcataaaacattaaaaagccatggcttcacagttgatcca
gaggatagtttaggtgactccttacctctggaaggctccttggaaagcaatgaatcagtg
gaattttaa
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