Nothoprocta perdicaria (Chilean tinamou): 112944487
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Entry
112944487 CDS
T07556
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03013
Nucleocytoplasmic transport
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112944487 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
112944487 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112944487 (THOC2)
03041 Spliceosome [BR:
npd03041
]
112944487 (THOC2)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112944487 (THOC2)
Spliceosome [BR:
npd03041
]
Complex C
Other components
EJC/TREX
112944487 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112944487 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
112944487
NCBI-ProteinID:
XP_025891717
Ensembl:
ENSNPEG00000006564
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MTDLPSIYLQLCRALSENKSYDNMGFRADIQQALYELAYHVVRGNLKHDQASNVLGDVIE
FREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESL
GLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILEN
IKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFY
QDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTM
VVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATS
HKPIAVALCQLVHVTIEPLYRRVGVPKGAKGSPIPPLPNKRAPKQAESFEDLRKEVFNML
CYLGPHLSHDPILFAKVVRLGKAFMKEVGTAKKFFSGGVVKFQSDGSKQEEKEKMEILFS
CLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKV
KAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSL
KYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLL
QYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRN
TKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFG
GFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNK
QQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDR
EVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKD
NWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVF
SDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRTIYEKECGNYPGFLTILRATGFDG
GNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLG
QALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFHHKDPPARNAVAATV
QNGPGGAGMPTSLSINTAKLEESTAEETDKLKEKSQGAVKVVNKAVNATPKVTTSNGNSA
SNSKILKEKDEKEKGGKEKEKEKKDKTPAATPEAKALGKDGKDKPKEERVNKEEKAREIK
EKTPKSEKEKEKAKKEEKASKEEKMKTIVTNIESKSAAEKEKEKEPSRERDVTKEMKSKE
NAKGGEKMPVAGSLKSPVPRTEASESERELKRRKVDTHSSPSHSSTVKDNLSELKDSSAK
HYINHTTPTLSKSKEREVEKKDLDKSRERSREREKKEEKDRKDRKRDHSNNDREVPQDST
KRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGS
KKESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcttcccagcatatatttgcagctatgccgtgctctcagtgaaaataaaagc
tacgataatatgggtttcagagcagatatccaacaggctttgtatgagcttgcttatcac
gttgtcagaggaaacctaaagcatgatcaagcttctaatgttcttggtgatgttatagaa
tttcgggaagacatgccctccattttagctgatgtattttgcatactagatattgaaaca
agctgcttagaagaaaaaagtaagagggatcattttacccagctggtgttagcatgtttg
tatcttgtatctgacactgttctaaaggagcgtttagacccagaaacactggagtcactg
ggacttatcaagcaatcgcaacagttcaatcagaaatctgttaaaataaagacaaaacta
ttttataagcaacagaagtttaatttgttaagagaggaaaatgaaggttatgcaaagctg
attgcagaactgggacaagacttatctggaaacatcactagtgacttaatccttgaaaat
atcaaatctttaataggatgttttaaccttgatcctaacagagttttggatattatcctg
gaagtctatgagtgcagacctgagtatgatgatttctttgtaccattgatagagtcttac
atgtacatgtgtgaacctcaaactctctgccatatccttgggttcaagttcaaattttat
caggatccaagtggtgagactccttcctccctatacagagttgctgctgtccttttgcag
cacaatctcattgacctggaagatctgtatgttcatcttcttccaggggacaatgccatc
attgaggaacacaagcgagagatagtagaagctaagcaaattgtcagaaaactcacaatg
gttgtcttatcctctgaaaagactgaagaaaaagagaaggagaaagaaaaggaggaggag
aagactgaaaagccacctgataatcaaaagcttggtttactggaagctctgttaaaaatt
ggtgactggcagcacgcacagagtattatggatcagatgcctccgttttatgctacttca
cacaagcctattgcagttgccctttgccaacttgtacatgtgacaattgaacctctgtat
cgcagggttggggtacctaaaggggctaaagggtcaccaattcctcctttgccaaacaag
agagcaccaaaacaagcagagagttttgaggacttgagaaaggaagtgttcaacatgctt
tgttaccttggacctcatctttcccatgatcccattttattcgcaaaagtggtgcgcctt
ggaaaagcatttatgaaagaggtcggaactgcgaagaaattcttcagtggcggagtggtt
aagtttcagtctgatggaagcaaacaagaagaaaaagagaaaatggagatcttatttagc
tgcttgttgagtattaccgatcaagtgttgcttccatccctttctttgatggactgcaat
gcatgcatgtctgaagaactgtggggaatgttcaaaacttttccataccagtaccggtat
cgtctttatgggcaatggaagaatgaaacgtacaacagtcaccctcttctagtgaaagtt
aaagctcaaaccatagatcgagccaaatatattatgaagcgtctaacgaaggaaaatgta
aaaccctctggaagacaaattggaaaactcagccacagcaatcctacaattttatttgat
tatattttatcacaaatacagaagtatgataacttaataactccagttgttgattcactg
aaatacctcacttcgctgaattatgatgtcttggcatactgtattattgaagctctggca
aatcctgagaaggagagaatgaagcatgatgacaccacgatctcaagctggctacagagt
ctggctagcttttgtggtgcagttttccgaaaatacccgattgagcttgctggcttactt
cagtatgtagcaaaccaactgaaagctgggaaaagctttgacttgcttattttaaaagag
gtggttcaaaaaatggctggcatagaaattactgaagaaatgacaatggaacagttggaa
gccatgactggtggagaacaactaaaagctgagggtggatactttggccagatcaggaac
acaaaaaaatcttctcagagattgaaggatgcattattggaccatgatcttgcccttccc
ctgtgcttgcttatggctcaacagagaaatggtgtgatctttcaagagggaggagaaaaa
catctgaagcttgtgggaaaactgtatgatcagtgccatgacaccctggtacaatttggt
ggatttttagcatccaatctgagcacggaggattacattaagagagtgccttctattgat
gttctctgtaatgagtttcacacacctcatgacgctgcatttttcctttcaagacccatg
tatgcacaccatatttcgtcgaaatatgatgaactaaagaaagctgagaagggaaataaa
cagcagcacaaagttcacaaatacattacatcatgtgagctggtgatggctcctgttcat
gatgctgtgatctctctgcaccttccgaaagtctgggatgacatcagtcctcagttttat
gctaccttctggtctctgacaatgtatgaccttgctgttccacatagtagctatgacaga
gaagtgaataaacttaaagttcagatgaaagccatagatgacaatcaggaaatgcctcca
aacaaaaagaaaaaagaaaaagaacgttgtacagctcttcaggacaagcttcttgaggag
gagaagaagcagttggaacatgtgcagagggtcctgcagagactgaaactggagaaggat
aactggcttctggcaaagtctaccaaaaatgagactatcacaaagtttctgcagttgtgt
atatttcctcgctgcattttttcggcaatcgatgcagtttattgtgctcactttgtagaa
ctggtgcatcagcagaaaacacctaatttctccacacttctctgttatgatagagttttc
tctgatattatatatacagtagcaagttgcactgaaaatgaagctagtagatatggcagg
tttttatgctgtatgctggagaccgtgactagatggcacagtgacagaaccatatatgaa
aaggaatgtggcaactatccaggcttcctcactatattacgggcaactggatttgatggt
ggaaataaagctgatcaactggattatgagaattttagacatgtggtgcacaaatggcat
tataaattaactaaggcttctgtacactgccttgaaacaggtgaatatacacacatccga
aatatcctgattgtgctgaccaaaatccttccgtggtatccaaaagtgctgaacctgggc
caagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgat
ctatatgcattggctatgggctattctgggcagttgaaaagtaggaagccttacatggta
cctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagta
caaaatgggccaggtggtgctgggatgcctacatctctctccataaatacagcaaaattg
gaagaaagcactgctgaggagactgataaactgaaggagaaatctcagggtgctgtgaaa
gttgttaataaagctgttaatgctacaccaaaagtgacaacaagcaatggaaatagtgct
tctaatagcaaaattcttaaagaaaaagatgagaaagaaaaaggtgggaaggaaaaagag
aaagaaaaaaaagacaagactccagctgccactccagaggccaaggcacttgggaaggat
ggaaaagataaaccgaaggaagaacgggtaaataaagaggaaaaagcaagagagatcaag
gagaagacaccaaaatctgaaaaagagaaggaaaaagcgaagaaagaagaaaaagcttca
aaagaagagaagatgaagacaattgttaccaacattgaatcaaagtcagctgccgaaaag
gagaaagaaaaggagccatccagagaaagagatgtaacaaaggagatgaaatccaaggaa
aatgctaaaggaggagaaaagatgccagtagctgggtccttgaagtcacctgttccccga
acagaagcatcagaatctgaaagggaactaaaacgccgcaaagttgatactcattcttct
ccatcacattcctcaacagtaaaggacaacctcagcgaactcaaggactcttcagcaaag
cactacattaaccacactactccaacactgtccaagagtaaggagagagaagtggagaag
aaagatttggacaagtcaagggaaagatcaagagagagagagaagaaagaggagaaggac
aggaaagatcgaaaaagggatcattcaaacaatgatcgggaagtaccacaggattcaacc
aaacgacgcaaagaagaaaatgggacaactggctcttcaaaacatagtaaaagtgaaagt
ccttctgattctcctcgttcaaatgaaaaggaaaaagagaagaacaaatcgaaatcttca
ggtaaagaaaaaggtgattcaatcaaagcagagaagatggaaaagagctcctctggcagc
aaaaaggagtcaagacacgataaagaaaaagcagaaaagaaagaaaaacgagacagcact
ggaggaaaagaagagaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
