Nothoprocta perdicaria (Chilean tinamou): 112944488
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Entry
112944488 CDS
T07556
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04382
Cornified envelope formation
npd04510
Focal adhesion
npd04512
ECM-receptor interaction
npd04518
Integrin signaling
npd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112944488 (COL4A6)
04518 Integrin signaling
112944488 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112944488 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112944488 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112944488 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npd04147
]
112944488 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
npd00536
]
112944488 (COL4A6)
Exosome [BR:
npd04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112944488 (COL4A6)
Glycosaminoglycan binding proteins [BR:
npd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112944488 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112944488
NCBI-ProteinID:
XP_025891718
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MGGTAATGRAGALALVLLCLGAELASAGGKKSYNGPCGGRDCSAGCKCFPEKGARGRPGP
IGTQGPIGAPGLTGPEGLPGAKGERGAVGSPGPAGQKGDKGPMGVPGFQGINGIPGHPGQ
PGHRGLPGVDGCNGTIGSPGLSGSDGLPGIPGPPGRPGPKGLKGEPIFAQSSLKGMKGEN
GLPGLDGISGPKGLPGPAGSIGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVG
LPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGEEGLPGLPGFGGIGEKGEKGVPG
LPGGRGLLGLDGSVGIPGRKGHPGVPGYPGHDGVEGMKGEIGDIGPPGPPIVIDREGVVI
SGAPGDPGTPGIPGPPGDEGISGLPGLPGAPGFPGLEQDAMGPGGSPGIPGVKGEIGDPG
RATIGLPGSPGRAGLPGLPGAPGLPGPSRPSYLPGAILDGRPGTPGEPGQRGPPGAFGPK
GYKGDAGDCACDGGATAGQKGISGLPGAPGSLGVPGIKGIRGDPGTAGAPGLPGPPASAG
QQGLPGPKGEKGEPSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGG
LGFPGEKGLPGLPGSKGHHGEIGSPGVGYPGPSGTRGPPGDPGADGFPGQPGLPGPPGIT
LPCVVPGAYGSPGTPGFPGLPGSKGSKGFPGIPGQPGLPGSKGQLGSPGVIGLQGGPGFP
GPRGEQGSHGLPGLDGTDGLPGKMGAPGLAGNKGAPGEVFGAESGARGEPGRPGFPGDKG
LPGDHGFPGPKGADGRPGLLGIKGEQGNPGYTGIPGLRGPPGPGGPFGIKGKPGPMGAVG
LVGAPGCQGLPGVKGLAGDTGPQGPAGMKGFPGPDGAPGSPGEQGFSGRPGAFGQDGRPG
FSGPKGEKGSPGLLGFPGMPGLPGVPGVNGFKGTTGTTGGRGSPGILGLQGQKGDRGDVG
PPGLPVLGPSEQALQFKGDKGEPGLAGLGGFPGPRGDKGFPGSHGQPGLPGPTGLPSRES
GSPGDPGFPGPSGHLGLPGQKGTTGIIGFPGMPGERGSDGIIGTPGFPGTMGLPGPKGDR
GDSVGVPGSAGAKGERGDPGFPGERGREGPKGEPGYPGSTGVNGLKGSPGDLGQEGPAGI
PGNAGPRGIVGPPGPPGQPGSAGFPGARGAAGPKGFPGFPGLNGLNGLPGTKGSPGTPGL
SEPGLKGPAGLPGPKGEEGSPGFGRGALGFPGPKGSSGDMGPPGPIGLPGLPGTPGVSLP
SDIPGRPGDAGHPGIDGSSGLPGPPGPRGAPGPASDQGDTGNPGFAGVPGLQGIKGNMGP
PGPVGLPGAFGFKGVRGEPGLMGMPGKDGPPGDPGYLGLKGEMGRRGLPGRPGAPGITPQ
PEKITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGAKGLPGRSGLKGHDGLTGSPGIVG
DPGPLGAPGPQGFEGVAGKMGSVGLPGMPGRSVGVGYTLVKHSQSEQIPPCPIGMNKLWD
GYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPI
PMMPVASIQISQYISRCSVCEAPSQAVAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGA
EGGGQSLVSPGSCLEDFRATPFIECNGARGSCHYFANKYSFWLTTVEQSQQFLSAPPSET
LKAGQLRTRVSRCQVCMKNL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcacggcggcgacggggcgcgcaggggcgctggcgctggtgctcctctgcctg
ggcgcggagctggcgagcgcgggtggaaagaagtcttacaatgggccttgtgggggccga
gattgcagtgctggatgcaaatgttttccagagaagggggcgcggggtagaccagggcca
attggaactcaaggcccaattggtgctcccggacttacaggaccagaaggtttaccagga
gcgaagggtgagagaggagcagtgggctcccctggaccagctggtcagaaaggtgataag
ggcccaatgggagttcctggatttcaaggcatcaacgggattccaggtcaccctggccag
cctggccacagaggcctgcctggcgtcgacggctgcaatggcaccatcgggagtccgggt
ctttctggatcagatggtcttcctggcatacctgggccacctggtcgtccaggtcccaaa
ggtcttaaaggagaaccaatttttgcccaaagcagccttaaaggaatgaagggagaaaat
ggtcttcctggcttggatggaatttctggaccaaaaggtcttccgggtcctgcaggttct
ataggccctataggtttgccaggtttgcagggtccagtgggtccccctgggccaccaggt
ccaaaaggtaacatgggattaggctttcaaggagagaaaggagaaaagggtgatgtagga
ctgcctggccctccaggtcccccaccatccactggaatacttgaatttatgggtttccca
aaagggaagcaaggagaaaagggtgagccaggccctcaaggcttccctggagaagaagga
ttgcctggcctgccgggctttggaggtattggagaaaaaggagaaaagggtgtccctggc
ctgccaggtggcaggggattgctggggctggatggatctgttgggattccagggagaaag
ggtcatccaggtgttccaggctaccctggacatgatggagtagaaggcatgaagggtgaa
ataggtgacattggtcccccaggccctcctatcgttattgacagggaaggagtagtcatt
tcaggtgctccaggtgaccctggaactccaggaattcctggccctccaggagatgaagga
atcagtggattaccaggccttccaggagctccaggttttccaggcctggaacaagatgca
atgggccctggaggatctccaggtattccaggtgttaagggtgaaataggagatcctgga
agagcgacgattggattaccaggcagtccaggcagagctggcttaccaggcctgccagga
gcaccaggattgccaggtccatcacgcccttcatacctcccaggtgctatcttggatgga
aggcctgggacaccaggggagcctggacagagagggccaccaggagcttttggtccaaag
gggtacaaaggagatgcaggtgattgtgcttgtgatggaggagctacagctggtcaaaaa
ggcatctcaggtctaccaggtgcaccaggaagccttggtgtgcctgggattaaaggcatc
agaggagacccaggcactgcgggggctccagggctgccaggccccccggcttcagctggt
cagcaaggtcttccaggccctaagggagaaaaaggggagccgtcctatgcaacaggcaga
ggtgctcgtggggaccgtggtgcaacagcacccagaggaccctcaggcatcccaggaact
cctggcagggatggacttccagggttgccaggtcctccaggccctccaggtgatggtggc
ctaggtttcccaggtgaaaaaggactgccaggattacctggctccaagggccatcatgga
gagattggttctcctggcgttggatatccaggtcctagcggaactcgtggaccaccaggt
gacccaggagcagatggctttccagggcaaccaggtcttcctggccctccaggtatcacc
ttgccctgtgtagttcctggagcatatggttcccccgggactcccggctttccaggattg
ccaggttccaaaggcagcaaaggctttcctggcattccaggacagcctggattacctgga
tcaaaaggacagctaggatctccaggagtaataggcttgcaagggggaccaggcttccct
gggcctcgaggagagcaggggtcacacggacttccaggactggatgggacggatggattg
cctggcaagatgggtgctccaggcttagctggaaataaaggagctcctggagaggtgttc
ggtgctgagagtggagctcgtggagaacctggtagacctggattcccgggtgataaaggg
ctgcctggggatcatggatttccaggaccaaaaggtgcagatgggagaccaggcctcctg
ggcattaaaggtgaacagggtaatccaggatatacaggcatcccaggactgcgggggcct
cccggacctggaggtccttttggcattaagggaaaaccaggacccatgggagcggttggc
cttgtaggagcaccaggctgtcaaggacttcctggagtcaaaggactggctggagataca
ggtccacaaggccctgctgggatgaaaggcttcccaggtcccgatggtgctccgggatct
cctggggaacaaggattctcaggacgacctggagcttttggtcaagatggacgtccgggg
ttctctgggccaaaaggtgagaaaggatctcctggcctgctcggtttccctggcatgcca
ggcctgcctggtgttcctggcgtgaatgggtttaaaggaactactggcacaactggagga
agaggaagccctgggatcctaggactccaaggtcaaaaaggtgacagaggtgatgtaggt
ccccctggcctccctgttcttgggccttcagaacaggcactgcaattcaaaggagacaaa
ggggagcctggattagctggacttggaggatttcccggacctagaggtgacaaaggtttc
ccaggcagccatggacagcctggtctccctggtccaaccggattaccaagcagagagagt
ggttctcctggcgacccaggtttccctggtccatctggacatcttggcctgccgggacag
aagggtacgactggcatcataggattcccaggaatgcctggagagagaggttcagatggc
atcataggaacacctgggttcccaggaactatgggccttcctggtccaaagggtgaccgg
ggagattctgttggtgttcctggcagtgctggagcaaagggagagcgaggggaccctggt
ttcccaggagagagagggagagaagggcccaaaggtgaaccaggatacccaggaagcact
ggagtgaatggactcaaaggtagtccaggagatcttggccaagaaggaccagcaggaatc
cctggaaatgctggaccgagaggaattgttgggcccccagggcctccaggacagccggga
tctgctggattccctggagctcgtggagcagcaggacccaaagggtttcctggatttccg
ggcttaaatggtctgaatggcttgccaggcacaaaagggtctcctggaacaccaggtctc
agtgaacctggactgaagggtcctgcaggtctcccaggtccaaagggtgaagagggttct
ccaggctttggcagaggagctctgggattccctggaccaaaaggatcatcaggagacatg
ggtccccctggtcctataggattacctggcttgccagggacacctggagtttctcttcct
tctgatatacctgggagacctggagatgcaggccacccaggaattgatggaagttcaggt
ctcccaggtcctccaggtccacgaggggccccaggcccagcttctgatcaaggtgacaca
ggcaatccaggttttgctggtgttcctggcttacaaggcattaagggcaacatgggcccc
cctggtccagttgggctccctggagcatttggattcaaaggtgtaaggggtgagcctggc
cttatggggatgccaggtaaagatggacctccgggggatcctggttaccttgggctgaaa
ggtgaaatgggtcgtcgaggtctccctgggcggccaggagctccagggataaccccacag
ccagagaaaatcacagctcctgcaggcttacctggcttgccagggatcgatggggtccct
ggctttgatggagatcctggattccagggcccagttgggaaaccaggtgcaaaaggtctg
ccaggcagatctggcttgaaaggacacgatggtttaactggatcacctggcatcgttggg
gatccgggacctttgggtgctccaggaccacaggggtttgaaggtgttgctggaaagatg
ggctccgttggtttgccaggaatgcctggccggagcgtgggcgttggatacactttggtg
aaacacagccagtcagagcaaatcccaccatgtcccataggaatgaacaagctctgggat
ggctacagcttattgtacgtggaggggcaggaaaagtcacataaccaggatcttggtttt
gctggctcctgtttgcctcgtttcagcaccatgccctttatttactgcaacatcaacgaa
gtgtgctattacgccagccgaaatgacaagtcctactggctctccaccactgctcccatc
cccatgatgcccgtggcgagcatacagatctcccagtacatcagtcgttgctcggtgtgt
gaagcaccttcccaggctgtggcagtgcacagccaggatatcaccatcccacagtgtcct
gttggctggcgcagcctctggattggatactctttccttatgcacactgcagcaggggcg
gaaggtggaggtcaatcccttgtctcacctggctcttgcctggaggatttccgtgccact
ccattcattgaatgcaatggtgccaggggatcgtgccattactttgcaaacaagtacagc
ttctggctgacgacagtggagcagtcgcagcagtttctcagtgcacctccctcagaaact
ctgaaagcaggacagcttcgaacacgcgtcagccgttgccaagtgtgcatgaagaactta
tag
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integrated database retrieval system
