Nothoprocta perdicaria (Chilean tinamou): 112945276
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Entry
112945276 CDS
T07556
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112945276 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npd02000
]
112945276 (TMC6)
03037 Cilium and associated proteins [BR:
npd03037
]
112945276 (TMC6)
Transporters [BR:
npd02000
]
Other transporters
Pores ion channels [TC:
1
]
112945276 (TMC6)
Cilium and associated proteins [BR:
npd03037
]
Other cilia and associated proteins
Stereociliary proteins
112945276 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2254
Motif
Other DBs
NCBI-GeneID:
112945276
NCBI-ProteinID:
XP_025892619
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MSGPPAVTLHVPEDAESEEQEPSPCSEGAMHSSFRQLIQEQSSLAEAEAAAALELEMRAQ
GREPPEPWPERGEEHGGFSAATLRVLASMPSRTIGRSRGAIIAQYCNRTARLRQRGGRPS
LRQLGLHPDADPAAGTLQEKRSLLAKELLGLSPGQRGRLLRAVPLSLAEKRSLRRELSEQ
SGSPQDSAQHQAPFSPCKYHLILGCRSLWYGLLSLCPNARPWHGALKRISGRFGSSVLSY
FLFLERLLAFNIILFLPLLGFVVALQAAHPPSPAPSPTPFTGLEILTGAGYFTHSLLYYG
YYSNTSLPSQPPYALPLAYALTTGACFVLTCVLLLCSMARAFGESYRLGGPAGDAAIKVF
CAWDFKVVRRRWAQLQADNIRTQLKELLAEQRSRSGSRSRCRHVAVRLLAWLLALGTVLG
CALAVHHVSEHMHAVQQAAGGGRQREAAQLALPLAVTLLSTAVPHVYNALAAWEKHESPV
LEVYVAVCRNLLLKSVLLGLLCYQWLSRGGVCSAEACWETCVGQELFRFVVMDLLFALLD
TLFGELLWRLLLEKRLKRKQRPEFDIARNVLELIYGQTLTWLGILFSPLLPAVQMLKLLL
LFYIKKSSLVQNCQAPSKPWQASHMSTVFLTLLFFPSFLGTAVFCCYAVWSAKPSAACGP
FRGSKSIYESGKGWLRSLESSQPALSWFAWIPQHLLESAAFLFLASGALLAVIYFNIQVV
KGQRRVIRLLREQIAKEGEDKVFLIQRLHSVYEQDKRRS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggccacccgccgtcaccctgcacgtccccgaggacgccgagagcgaggagcag
gagccgagcccctgcagcgagggcgccatgcacagctccttccggcagctcatccaggag
cagagcagcctggcggaggcggaggcggcggccgcgctggagctggagatgcgggcgcag
ggcagagagcccccggagccgtggccggagcgcggcgaggagcacggcggcttctcggcg
gccacgctgcgcgtgctggccagcatgcccagccgcaccattgggcgcagccgtggggcc
atcattgcccagtattgcaaccgcacggcccggctgcggcagcgcggcggccgcccgtcc
ctgcggcagctcggcctgcaccccgacgccgaccccgccgcgggcaccctgcaagagaaa
cggagcctcctggccaaggagctgctgggcctctcgccggggcagcgcgggcgcctgctg
cgcgcggtgccgctcagcctggccgagaagcgcagcctcaggcgggagctgagcgagcag
agcggctccccccaggacagcgcccagcaccaggcccccttctcgccctgcaagtaccac
ctcatcctcggctgccgctcgctctggtatgggctgctctcgctgtgccccaacgcccgg
ccctggcacggcgccctgaagcgcatcagcggccgcttcggctccagtgtcctctcctac
ttcctcttccttgagaggctcctggccttcaacatcatcctcttcctcccgctcctgggc
ttcgtggtggcgctgcaggcggcccatccgccctcgccggcccccagtcctacgcccttc
accggcctcgagatcctcaccggagcgggctacttcacccactcgctgctctactacggc
tactacagcaacacgtccctccccagccagccgccctacgcgctgccgctggcctacgcg
ctcaccacgggcgcctgcttcgtgctcacctgcgtgctgctgctgtgcagcatggcccgc
gccttcggggagagctaccgcctgggcggccccgcgggcgacgccgccatcaaggtgttc
tgcgcctgggacttcaaggtggtgcggcggcgctgggcccagctgcaggccgacaacatc
cgcacccagctgaaggagctgctggcggagcagcggtcacgctcgggctcccggagccgc
tgccggcacgtggccgtgcgcctcctggcctggctgctggcgctgggcacggtgctgggc
tgcgcactggccgtgcaccacgtctcggagcacatgcacgcggtgcagcaggcggctggc
ggcgggcggcagcgggaggcggcgcagctggcgctgcccctcgccgtgacgctcctcagc
acggctgtgccccacgtctacaacgcgctggccgcctgggagaagcacgagtcccccgtg
ctggaggtgtacgtggccgtctgcaggaacctgctgctgaagtcggtgctcctggggctg
ctttgctaccagtggctgagccgcggcggtgtctgctcggcggaggcgtgttgggagacc
tgcgtgggccaggagctcttccgcttcgtggtgatggacctcctgtttgcgctgctggac
acgctcttcggggagctgctctggaggctgctcttggagaagaggctcaagaggaagcag
aggcccgagttcgatatcgcccgcaacgtgctggagctcatctacgggcagacgctgacg
tggctgggcatcctcttctcgccgctcctgccggccgtgcagatgctgaagctgctgctg
ctcttctacatcaaaaagagcagcctcgtgcagaactgccaggcgcccagcaagccctgg
caggcgtcacacatgagcaccgtcttcctcaccctgctcttcttcccctccttcctgggc
accgccgtcttctgctgctacgccgtctggtcggcgaagccgtcggcggcctgtggcccc
ttccgcggctccaagagcatctacgagtcggggaagggctggctgcgctcgctggagagc
tcgcagcccgcgctctcctggttcgcctggatcccccagcacctgctggaaagcgccgcc
ttcctcttcctcgcttctggcgccctgctggccgtgatctacttcaacatccaggtggtg
aagggccagcggagggtcatccgcctgctgcgggagcagatcgccaaggagggagaagac
aaggtcttcctcatccagaggcttcactccgtttacgagcaggacaagagacgcagctga
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integrated database retrieval system
