Nothoprocta perdicaria (Chilean tinamou): 112945463
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Entry
112945463 CDS
T07556
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112945463 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112945463 (CPSF3)
03019 Messenger RNA biogenesis [BR:
npd03019
]
112945463 (CPSF3)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112945463 (CPSF3)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112945463 (CPSF3)
U7-dependent histone pre-mRNA processing factors
112945463 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
112945463
NCBI-ProteinID:
XP_025892859
Ensembl:
ENSNPEG00000011880
UniProt:
A0A8C6ZR52
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLCYQLQRL
TADVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMFADTVTTVILEVQSNPKI
QKAAVQKIAKKVDAEVYRKRMEIMLQDMFGEDCVSSKDGSVLCVTVDGKTASISLDTRTV
ECEPGSEDDESLREMVELAAQRLYDALNPI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagcgcaaggccgaggcgctcatcccggcggaggagagcgaccagctgctc
atccgcccgctaggtgctggccaggaagtaggaagatcatgcattattctggagtttaaa
ggaaggaaaatcatgctcgattgtggaatccaccctggactggaaggaatggatgctctt
ccttacattgatttgatagatcctgctgagattgatctcctcctcattagccacttccat
ttagatcattgtggggctttaccatggtttttgcagaaaacaagttttaaaggaagaacc
ttcatgacacacgccacaaaagccatttacaggtggctcctctcagactatgtcaaagtc
agcaacatatcagcggatgacatgctgtacacagaaacagacctggaagagagcatggac
aagatcgaaaccatcaacttccatgaagtgaaagaggttgcaggaatcaaattctggtgt
taccatgcaggccatgtcctgggagctgccatgttcatgattgaaatagctggtgtgaag
cttttatacacaggtgatttctcaagacaggaagaccgacatctgatggcagctgagatt
cccaatattaaacctgatattcttataatcgaatccacctatggcactcacattcatgag
aaaagggaagagcgagaggcgaggttctgtaacaccgtgcatgacattgtgaacagagga
ggcagagggcttattcctgtgtttgccttaggccgagctcaagaactgctcttaatttta
gatgaatactggcagaaccatcctgaactccatgatattcctatatactatgcatcctct
ttggcaaagaaatgcatggcagtttatcagacctacgtcaatgccatgaatgacaaaatt
cgcaagcaaataaacatcaacaatccatttgttttcaagcacattagcaatctgaagagc
atggaccactttgacgatattgggccaagcgttgtgatggcttcgccaggtatgatgcag
agtggcctgtccagggagttgtttgagagctggtgcacggacaagagaaatggagtcatc
attgcagggtactgtgttgagggaacccttgctaagcacatcatgtctgaacctgaagaa
atcacgactatgtcagggcaaaaactgcccctgaagatgtctgtagattacatttctttc
tctgctcacacagattatcaacaaactagtgagtttatccgggccctgaaacctccccac
gtgattttagttcatggagagcagaatgaaatggccaggttgaaagcagcattgatacga
gaatatgaggataacgatgaagttcatatagaagtgcacaatcctaggaatactgaagct
gtgacgttgaacttcagaggagaaaaacttgctaaggtgatggggtctttggcagataag
aagccagagcaaggacagagaatttctggaatcctggttaaaagaaattttaactatcat
atactttctccttgtgacctttccaattacacagacctggcgatgagcactgtaacgcag
acacaagccattccgtatactggccctttcaatctgctttgttatcagctacagagactt
actgctgacgtagaagaaatagaaatccaacaaaaaccagccttgaaggttttcaaaaat
ataactgtgatccaggaaccaggcatggttgtgctcgagtgggtagcaaatcctgctaat
gacatgtttgcagacaccgtgacaactgtgatactggaagttcaatcaaatcctaaaata
caaaaagctgctgtacaaaagattgccaaaaaggtagatgcggaggtgtataggaagagg
atggagatcatgcttcaggacatgtttggggaagactgcgtaagttcaaaagatggctct
gtcctgtgtgtcacagtggatggaaaaactgcaagcatctccctggacactcggacagtt
gaatgtgagccgggaagtgaagatgacgaatcccttcgggaaatggtggaattggctgct
cagaggctctatgatgccctcaacccaatatag
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integrated database retrieval system
