KEGG   Nothoprocta perdicaria (Chilean tinamou): 112945513
Entry
112945513         CDS       T07556                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
npd  Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03420  Nucleotide excision repair
npd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:npd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112945513 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112945513 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:npd04121]
    112945513 (ERCC8)
   03400 DNA repair and recombination proteins [BR:npd03400]
    112945513 (ERCC8)
Ubiquitin system [BR:npd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112945513 (ERCC8)
DNA repair and recombination proteins [BR:npd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112945513 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD_LRWD1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 112945513
NCBI-ProteinID: XP_025892920
Ensembl: ENSNPEG00000000085
LinkDB
Position
Unknown
AA seq 399 aa
MLGFLAARQAGLEEPARLRRAEATRRVLSLDLNKDRDVERIHGCGINSLDIEPVEGRYML
SGGSDGVIVLYDLANFSRKPCYTCKAVCSVGRSHPNVHKYSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFDGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSH
ILQGHRQEVLAVSWSPRHEYILATASADGRAKLWDVRRASGCLTTLDQHNGEKCKTSSEG
VNTTHNGRVNGLCYTHDGLHLLTVGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKFTI
SWGCNPEFAFVPYKSTIAVYTIFSGELITRLRGHYSTVDCCVFQPHFQELYSGSKDCNIL
AWIPALREPIPDDTSEKSLSQQQLNPAYEDAWSSSEDEG
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgctggggttcctcgcggcgcggcaggccggcctggaggagcccgcgcggctgcgccgg
gcggaggccacgcgcagggttctgagtctggatttaaataaagacagggatgtggaaaga
atacatgggtgtggtatcaactcccttgatattgaacctgttgaaggaagatatatgttg
tcaggaggatcggatggtgttattgtactttatgaccttgcaaacttcagcagaaagcct
tgctacacatgtaaagcagtttgctctgtaggaaggagccatcctaatgtacataaatac
agcgtagagacagtgcagtggtatcctcatgacactggcatgtttacatccagctccttt
gataaaacattgaaaatatgggatacaaatactttacagcctgcagatgtgtttcatttt
gatggaactgtctatagccatcatatgtctccagttgctaccaaacattgtttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgttctcac
attctgcagggtcacaggcaagaagtgctggcagtgtcttggtccccacgtcatgaatat
attttggcaacagcaagtgctgatggtagagcaaaattatgggatgtgaggagagcatct
ggatgtcttactacacttgatcagcacaatggagagaagtgcaaaacatcttctgaagga
gtaaacactacccacaatgggcgagtgaatggtttatgctacacacacgatggacttcat
ctgttgaccgttggtacagatgatcggatgagactctggaacagctccaccggagagaac
acactagtgaactatgggaaagtctgtaatgaaagtagaaaaggactcaaattcaccatc
tcctggggctgcaacccagagtttgcttttgtaccctataagagcaccattgctgtttac
acaattttctcaggagaactcataactaggcttagagggcactatagtactgttgactgc
tgtgtgtttcaacctcattttcaggagctttatagtggtagcaaagactgcaatatcctt
gcttggatacctgcccttcgagagccaattcctgatgacacttctgagaagtctctttct
caacagcagttaaatccagcatatgaggatgcatggagcagcagtgaggatgaaggctga

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