Nothoprocta perdicaria (Chilean tinamou): 112945757
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Entry
112945757 CDS
T07556
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
npd04990
]
112945757 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
npd04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
112945757 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
112945757
NCBI-ProteinID:
XP_025893204
LinkDB
All DBs
Position
Unknown
AA seq
1578 aa
AA seq
DB search
MRKETEEIESPKRSIRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPD
VVLRGSSDGRGSDSETDLPHRKMPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTFY
VPAPLRKKKAEREEYRKSWSTATSPLGDRPFSKTHPETIEEELTEASGPCEKEGVGSVPL
ETSPTQNEVGLNQSKESSIGNSAACSAKETPASKGKDEEELRKLRRLEQAGIKVMSAAQR
YGSKKQTCGDSGSPPDIILRRDNPFMTLYQGKDSGSEDEAASRVPDLEKDDFATRRARMN
QPKQPVPFNAFLIGPYINKDKGKLEDIKKPLQMEKQEHARGSQMHMASARQIVTHTESSF
LQAKKSESKEEEEGKAPDTERADLAKRKSQSTLPQQREDAFVNASIIKPDLKTWKRLKLL
EESSEEDFECPSDTWPSAEITVKAAACDDFAVRKARANKKASSPKQKFVHFGPVTEIDQQ
KWDKLSIGKASSRSKKEEENKKDVVDTHTDTGSSSPTTVDISQSAGDSEEVCRPQNDSSE
VARSGADEHSRRTLSPVPAISVASEKQTQHSLNKQQESTEEECNGPLPDIERDDMLVRRM
GTFQRRVTSAVHVPCPPPSVAPHVLQQQHGEAIAREKDLKTPREAESTESREESQEQLEI
PHQQSDGTENKVKFPDPQRDDMLARRTGAFLRQSGPSVKQFLPMPFSKQQSKQGTTRELD
KKTKRPEKYPQVCNNSSGKLATQPQQEQQQEQERCDLPPVGQNDIISTAQMGDHSLNEVP
PDQTSNLQEVSEENKNETLSSENEHLQTFGPRTAVSDDAESVSMFDMRCEDEAVTQPHSK
ARHEKLQNIHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLSGEGTNER
RKSIKTYREIVEEKERRERELHEAYKNAKSQEEAESILQQYIERFTISEAVLERLQMPKI
LERSHSVEPDSPLKDPNPLRYLRQQSLPAPKFTATIEATIIPPTELEPSGSTGRTSPSKT
VVSKAVPMLTPKPYSQPKNTQQVLKNFKVDGKVSMNGENVNGVEEKDKECTTVVFTPSPS
RSLKFDGVARGDRSPVELKKDPTSTELGLQRPAIQSMHKEPTASSVEEDTPGAGSGSAGP
VSLVCASPVSDQKQFESTAACASPIVTTLELPASPIPLEEAASSEKDVKKPEKEPQEETQ
LPAAQEVMKPKALEPEGSVVLPFLKKLPETSQVSLHNSDLQADSDSGDKSNRFNFWSWDP
EEERKRQERWQHEQERLLQEKYQREQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVV
PFIVSSNSAEFLSSSSSATEGSKTVNSTDSNNSPEEGKQQEATRQKKMLWEQDSMPSLKS
KENELQQEKNSSVNKVLSGHPETGILKGSEQEHQLPVPERHSSARLNLPLTQEVSWSQQA
LTKPSPQRADDTRLRTSPTQGVGPQANSTGEKRRAACHENFRPGPSSPCSPAAPSYSPNR
SVSGKKLCSTCGLPLGKGAAMIIETLGLYFHIQCFRCGICKGQLGDAASGTDVRIRNGLL
NCNDCYIRSRTAGQPTTL
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggagacggaggagatcgagagccccaagcgcagcattcgggacagcggctac
atagactgctgggactcggagcgcagcgattccctctcgccgccgcgccacggcagggat
gactccttcgacagcctggactcctttggatcccgctcgcagcagacgccctccccagat
gtagtgctccgagggagcagtgatgggagaggaagtgactctgagactgacctgccacac
agaaagatgccggatgtgaaaaaagatgatatgtctgcaaggcggacctcccatggggaa
cctaaatcagctgtgccttttaaccagtacctcccaaacaagagtaatcagactttctat
gtccccgctccgcttcggaaaaagaaggctgaacgggaggagtatcggaagagttggagc
actgcaacgtcgcccctcggagacaggccattcagcaaaacccacccagaaaccatagag
gaagaactgaccgaagcatcgggaccctgtgaaaaggagggagtgggctccgtgcctctg
gagacaagccccactcagaatgaagtaggtttgaatcaaagcaaagaaagctccataggc
aactctgctgcgtgtagtgctaaagaaacaccagcgtccaaagggaaagatgaggaagag
ctcagaaaattaagaagacttgaacaagctggcatcaaggtgatgtcagcagcgcagcgc
tacggcagtaaaaagcaaacgtgcggagacagcggcagccccccagacatcatccttcgc
agggacaaccccttcatgacgctttaccaggggaaggattcgggctccgaagatgaagca
gccagcagagttcctgatttagaaaaggatgattttgccactcggagagccagaatgaat
cagcccaaacaaccggtgccatttaacgcttttttaattggaccctatataaataaagat
aaaggtaaactggaagacattaaaaagccattgcagatggaaaaacaggaacatgcaaga
ggaagccagatgcacatggcatcggcaaggcaaatagtgacacacacagagagctcattt
ctgcaagctaagaagagtgagtccaaggaggaagaggaaggcaaagcgcctgatactgag
cgagctgatctggctaagcggaaatctcagagcacccttcctcagcaacgagaagatgca
tttgtgaatgcctctataataaaaccagatctgaagacctggaaaagactgaaattgctg
gaggagtccagtgaagaagattttgaatgtccctctgacacttggccatcggctgaaatc
acagtgaaagcagcagcctgtgatgatttcgctgtccgcaaagcgagagcaaacaaaaaa
gccagtagccccaagcagaagtttgtgcattttgggccagtaactgagatagatcagcag
aagtgggacaagctcagtattggcaaagcttcctccaggagtaaaaaagaagaggaaaac
aagaaggatgttgtggacactcacactgatactgggagttcttctccaaccactgttgac
atttcccaatctgctggagacagtgaggaagtctgtaggccacagaatgattccagtgag
gtagcaaggtcaggtgcagatgagcatagcaggaggacattatcacctgtcccagctatt
tctgtggcctctgagaagcaaacccaacacagtttgaacaaacagcaggaaagcactgag
gaagagtgcaacgggcctttacctgacattgagagagatgacatgttggttagaaggatg
ggaacttttcagagacgtgtcactagcgctgttcatgtaccttgtcctcccccatcagtt
gctcctcatgtgctgcagcagcagcacggggaggcaatagctcgtgagaaggatttgaag
actccacgggaagcagaaagtactgaaagcagagaggagagccaagaacagcttgaaatc
cctcatcagcagagtgatggaacagaaaacaaagtgaaatttccagacccacaaagagat
gacatgttggccaggagaactggagcttttctaaggcagtctgggcccagtgttaaacaa
ttccttcccatgccattttccaagcagcagagtaagcagggcacaactagagaacttgac
aagaaaaccaagaggcctgaaaaatatccacaagtctgcaataatagctctggaaaactt
gcaacgcaacctcagcaagaacagcagcaagagcaggaaagatgcgatctccctcctgtg
ggacaaaatgatattatttctactgcccaaatgggtgatcatagccttaacgaagtcccc
ccggatcaaacatcaaatctgcaggaggtttctgaggaaaataaaaatgaaacattgtca
tccgagaatgaacatctgcaaacattcggccccagaactgctgtgtctgatgacgcagag
agcgtgagcatgtttgacatgaggtgtgaagacgaagccgtgacgcagcctcatagcaaa
gctcgccatgaaaaactgcagaacatacacaaccaactcaaagaggatgagactagatgg
caagacgaccttgctcggtggaagagtcgccgacggagtgcttcacaggatttaataaag
aaggaagcagagagaaagaaaatggaaaggttgttgtctggagagggaacaaacgagcga
agaaaaagcatcaaaacctaccgagaaattgtggaggagaaagagaggcgagagagggag
ctgcatgaggcgtacaagaacgcgaagtctcaggaggaagccgagagcatcctccagcag
tacatcgaaaggttcaccattagtgaagctgtccttgagcgtctgcagatgccaaaaatt
ctggagagaagccattcagtggagccagattccccactgaaagacccaaatcctctaaga
tacttaaggcagcaatcgctgcctgctccaaaattcactgccaccattgaagcgaccatt
attccacccactgaattagagcccagtggttcgacgggccgcacatctccgagcaaaact
gttgtctccaaggctgtgcctatgctgacacctaagccttactcacaacccaaaaataca
cagcaagttttaaaaaattttaaggtagatggaaaagtcagcatgaatggagagaatgtc
aacggagtagaagagaaggataaagagtgcacgacagtagtatttactccttcaccaagc
agatctctgaaatttgatggagtagccagaggggacaggtccccagtcgagttgaagaag
gaccccacaagcactgagctcggcttacagaggcctgccattcagagcatgcacaaagag
ccaacagcctcttcagtggaagaagacacaccaggggctggctctggaagtgcaggacct
gtgagcctggtgtgcgcttccccagtttcagatcagaagcagtttgagtcaactgcagct
tgtgccagccctatcgtgaccaccttagagttacccgccagccctatccctttggaagaa
gctgcttccagtgagaaggatgtgaagaaacctgaaaaggaaccacaggaggagacccag
ctccctgctgcgcaggaggtaatgaagccaaaagccctggagccagaggggagtgtagta
ctcccctttttaaagaaactacctgagaccagccaagtttctctgcacaattctgatcta
caagctgattctgatagtggtgacaaatcaaatcgtttcaatttctggtcctgggatcca
gaagaagagcgaaagcgacaggaaaggtggcaacatgagcaagaacgcttgcttcaggag
aagtaccagagggagcaggacaagctgaaagaggaatgggagaaggcacaaaaagaagtt
gaagaggaggaacgtagatactatgaggaggaacgtaagataattgaagatacggtggtt
ccattcattgtgtcttcaaactctgctgaattcctctcctcctcttcatctgctactgaa
ggaagcaagacagtgaactccactgattccaacaattctccagaggaaggcaaacaacaa
gaagctacaaggcagaaaaaaatgctttgggagcaggacagtatgccatctctgaaaagc
aaagaaaatgaactccagcaagaaaagaatagcagtgtaaataaagtgctctcaggacat
ccagagacaggtatcctgaaaggaagtgagcaggagcaccagctgcctgtgccggaacgc
cactcatctgcccggctaaatctaccactaactcaggaggtctcgtggagccagcaggca
ctgaccaagccgtccccgcagcgcgcggatgacacgaggctgaggacgtcccccactcag
ggtgtgggtccccaggcgaactccacgggggagaaaaggagggcagcctgtcatgagaat
ttccgccctgggccatcatctccctgttctcctgctgctccaagctactcacccaacagg
tctgtcagtgggaagaagctttgttccacctgtggtcttccccttggaaaaggagctgcc
atgattatcgaaacactcggtctttacttccacattcagtgcttcaggtgtggcatttgc
aagggacagctgggagatgcagcaagtgggacagatgtcaggattagaaacggtcttttg
aattgcaatgattgttatatccgatccagaactgctgggcagccgactacgttgtga
DBGET
integrated database retrieval system
