Nothoprocta perdicaria (Chilean tinamou): 112945846
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Entry
112945846 CDS
T07556
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112945846 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112945846 (DHX15)
03009 Ribosome biogenesis [BR:
npd03009
]
112945846 (DHX15)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112945846 (DHX15)
Spliceosome [BR:
npd03041
]
Complex A
U2 snRNP components
U2 related factors
112945846 (DHX15)
Complex B
112945846 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112945846 (DHX15)
Ribosome biogenesis [BR:
npd03009
]
Eukaryotic type
90S particles
Helicases
112945846 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
AAA_29
Flavi_DEAD
Atrophin-1
AAA_25
Motif
Other DBs
NCBI-GeneID:
112945846
NCBI-ProteinID:
XP_025893317
Ensembl:
ENSNPEG00000000239
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTADGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDFR
PTSNSTYYAAAGIPAIKPAMMPHSINPFTNLPHTPRYYDILKKRLLLPVWEYKDRFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctagacctgggcgacgactacagctcgagcaagaagcgcacc
gccgacgggaaagatcgggaccgggacagggaccgtgacgaccgttctaaagatcgtgac
agggatcgtgacagagacagagatcgtgatagagagagggacaaggaaaaagattttcga
cctacatcaaattctacatattatgctgctgctgggataccagctataaaaccagcaatg
atgccacacagtattaaccctttcacaaatctaccacatacacctcgatattatgacatc
ctgaagaaacggctactactccctgtctgggaatataaagatagatttacagatattttg
attagacatcagtcatttgtcctggttggagagactgggtctggtaaaacaacacagatc
ccccagtggtgcgttgattacatgcgctcgttacctgggccgaagagaggagtggcctgt
acccagcccaggagagtggctgccatgagcgtggcccagcgagttgctgatgagatggat
gtaatgctgggccaggaggttggttactccattcgatttgaagattgcagtagtgcaaaa
actattttgaagtatatgactgatggtatgttacttcgtgaggcaatgaatgatcctttg
ctggagcgctacggtgttataattcttgatgaagcccatgagagaaccctggctactgat
attttgatgggagttttgaaagaggttgtaagacagagagccgacttgaaggtcatagtt
atgagtgctactttggatgctggcaagtttcagatctatttcgataactgtcctctcctt
actatcccgggacgtacccatcctgtggagatcttttatactccggaaccagagagggac
taccttgaggctgcaattcgaacagtgatccaaattcacatgtgtgaagaagaagaagga
gatctcttgctctttcttactggacaagaggagattgatgaagcctgcaagaggataaag
cgtgaaattgatgatttgggccctgaagttggtgacatcaaaatcattccgctgtattct
actcttcctccacaacagcagcaaaggatttttgaacctcccccaccaaaaaagcaaaat
ggagcaatagggagaaaggttgttgtgtccaccaacatcgctgagacatcattaactata
gatggtgttgtgtttgtgattgatcctggctttgcaaaacaaaaggtgtacaacccccgc
atccgtgtggagtcgctcctggtgacggccatcagcaaagcctcggcccagcagcgagcc
ggccgcgccggccgcaccaggccgggcaagtgcttcaggctctatacggagaaggcttac
aaaacagagatgcaggacaacacataccctgaaattttgagatctaatttgggatctgtg
gtgttgcagctcaagaagcttggtatagatgacttggtacactttgattttatggatcca
ccagctcctgaaactttgatgagagccttagagcttttgaattatctagctgctttaaat
gatgatggagacttgactgagttgggatccatgatggcggaatttccactggacccacaa
ctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaggcaaagaaagcagca
gatgaagccaagatgagatttgcccatatagatggagatcacttgacattgctgaatgtc
taccatgcgttcaaacaaaatcatgagtcggttcagtggtgttacgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccagcagctgtcacgaatcatggataga
tttaatttgcctcgcagaagcacagactttaccagccgagactattacatcaatataagg
aaggcattagtcactgggtatttcatgcaggtggcgcatctggagcgaacggggcactac
ctgaccgtgaaggacaaccaggtggtgcagctgcatccttccactgtgctggatcataag
ccggaatgggtcctctataatgagtttgtccttaccacaaagaattacattcggacatgt
acagacatcaagccggaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtccaag
gaatactcacagtactga
DBGET
integrated database retrieval system
