Nothoprocta perdicaria (Chilean tinamou): 112945851
Help
Entry
112945851 CDS
T07556
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03082
ATP-dependent chromatin remodeling
npd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112945851 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112945851 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npd01009
]
112945851 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112945851 (SMARCB1)
03036 Chromosome and associated proteins [BR:
npd03036
]
112945851 (SMARCB1)
Protein phosphatases and associated proteins [BR:
npd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112945851 (SMARCB1)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112945851 (SMARCB1)
SWI/SNF complex
112945851 (SMARCB1)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112945851 (SMARCB1)
PBAF complex
112945851 (SMARCB1)
SWI/SNF complex
112945851 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
112945851
NCBI-ProteinID:
XP_025893326
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaaccttcgggcagaagcccgtcaagttccagctggag
gaggacggcgagttctacatgatcggctccgaggtggggaattatctgcgtatgttccgg
ggttccctgtacaagaggtacccgtcgctgtggaggcgactcgccacagtggaggagagg
aagaagatagtggcatcttcccatgaaaatcagcgatctcacagtcccaggagatatcat
ggctataccacgttagccactagtgtgacactgctaaaagcctctgaagtggaagagatc
ttggatggcaatgatgagaagtataaagcagtgtctatcagcacagaacctcccacctac
ctcagggaacagaaggcaaagaggaacaaccagtgggtgcctaccctgcccaacagctct
catcacctggatgcggtgccgtgttcaacgaccatcaacaggaatcgcatgggcagggac
aagaagaggactttcccgctctgctttgatgaccacgacccagcagtgatccatgagaat
gcgtcacagccggaggttctggttccaatcaggctggatatggaaattgatgggcagaag
ctcagagatgcatttacatggaacatgaatgaaaagctaatgaccccggaaatgttttct
gagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctattgcctcc
gccatccgacagcagatagagtcatacccaacggacagtattctagaagaccagtcagat
caacgagttattattaagctaaacatccacgtagggaacatctcccttgtagaccagttt
gaatgggacatgtcagagaaggagaattcaccagaaaagtttgccttgaagctgtgctcc
gagcttggcctgggtggcgagtttgtcaccactatagcctacagtatccgcggacagctg
agttggcatcagaagacctacgccttcagtgagaaccccttgccgactgtggaaatcgcc
atccgcaacacaggggacgctgaccagtggtgccctcttctggaaaccctcacagatgcc
gagatggagaagaagatcagagaccaggacagaaatacaaggcgcatgagacgtttggcc
aatactgctccggcctggtaa
DBGET
integrated database retrieval system
