Nothoprocta perdicaria (Chilean tinamou): 112946357
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Entry
112946357 CDS
T07556
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112946357 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112946357 (PRPF40A)
Spliceosome [BR:
npd03041
]
Complex A
U1 snRNP components
U1 related factors
112946357 (PRPF40A)
Complex B
112946357 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
112946357
NCBI-ProteinID:
XP_025893946
Ensembl:
ENSNPEG00000007848
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVSSMDAQVGVTPPGTQTTHPVVCAAQQTATTNS
SVSEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSIKPEDSTAATAAAAEATNTTAAATT
AEAAAGAASSTAAPAATATSDAEATAAASAAENESAAASEDQGQQATAAAGQEQGTEAAA
TEDSSKQEASGDAASKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAM
KMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTS
TTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILD
NMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKS
LLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALD
LFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKL
AFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPA
FEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGTESEDDDS
HSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIEREKDKKDR
ECEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtggaccgcggctccctcatgatggggcacccgggcatgccgcac
tacccgcccatggggatgcaccccatgggccaaagaccgcctaatatgccccccgttccg
catgggatgatgcctcagatgatgcctcccatgggaggacccccaatggggcagatgcct
gggatgatgcagtcagtaatgcctggaatgatgatgtctcacatgtcccaagctgctatg
cagcctacggttccgccaggagtgagcagtatggatgcacaagttggtgtaacaccacct
ggaactcaaacaacacatcccgtcgtttgtgcagcccagcaaaccgccacgaccaacagt
tctgttagtgaggagcattctaaacagaaatctacatggacagagcacaaatcacctgat
ggaagaacatactactacaatactgaaacaaaacagtccacctgggagaagccagacgat
ctcaaaacgcctgccgagcaattgttgtccaagtgcccctggaaagagtacaaatctgat
tctggaaagccctactattataattcccaaacaaaggaatcgcgctgggcaaagcccaaa
gaacttgaggatcttgaagcaatgataaaagctgaagaaaacagcatcaagcctgaagac
tccactgcagcaacagcagctgcagcagaggcaacaaacacaactgctgcagccacaact
gctgaagctgctgcaggtgctgcttccagcactgctgctcctgcagcaacagccacgtct
gatgcagaagctactgcagctgcttctgcggcagaaaatgaaagtgcagccgcctcggag
gatcagggccagcaagcgactgcggccgctgggcaggagcagggcacagaagctgcagct
acggaggactcttccaagcaggaggcctcaggagatgctgcttcaaagaaagaggatgaa
gatgcccaaccagttaaaaaaacctatacatggaatacgaaggaagaagcaaaacaagca
tttaaagaactgttaaaggaaaagcgggtaccatccaatgcttcctgggagcaagctatg
aaaatgatcattaatgatcctagatacagtgctttggcaaagttaagtgaaaaaaagcaa
gcctttaatgcttacaaagttcaaacagaaaaagaagaaaaagaagaagcaagatcaaaa
tataaagaagctaaagaatctttccagcgctttcttgaaaatcatgaaaaaatgacgtcc
acaacaagatacaaaaaagctgaacaaatgtttggggagatggaagtctggaatgccatc
tctgagcgcgatcgtctggaaatttatgaagatgtcttattttttctgtctaagaaagag
aaggaacaagctaagcagttacgaaagagaaattgggaagctttgaagaacatactagat
aacatggctaatgtcacctactctaccacttggtcagaagctcagcagtatctgatggac
aatcccacctttgcagaagacgaggagcttcagaatatggataaggaagacgcactgatc
tgtttcgaggaacatatcagggcactagagaaagaggaggaagaagaaaagcagaaaagt
ttgcttagagaaagaagacgacagcgtaaaaacagagaatcttttcagatatttttagat
gaattgcatgaacacggtcagttgcattcaatgtcctcttggatggagttatacccgacc
ataagctccgacatcagattcactaatatgctcggtcagcctggatcaacagcacttgat
cttttcaagttctatgttgaagacttgaaagcacgttaccatgatgaaaagaagataata
aaagatatcttaaaggataaaggatttgtggttgaagtgaatacttcttttgaagacttt
gttacagtcatcagctcaactaaaagagctactactttagatgcaggaaatatcaaactg
gctttcaatagtctgctggaaaaggcagaagcccgtgaaagagagagggagaaagaagaa
gcgcgcaagatgaagcggaaagagtccgcgttcaagagcatgttgaaacaagcaacgcct
cctattgaactggatgctgtctgggaagacatcagggatagatttgtgaaggaaccagct
ttcgaagacatcactctagaatctgaaagaaaaagaatatttaaagatttcatgcatgtg
ttagagcatgaatgccagcatcatcattcaaagaataagaaacattctaaaaagtctaaa
aaacatcacaggaagcgatcccgctctcgttcaggcacggagtcggaggatgacgatagc
cattcaaagaagaagaggcagcgttcagaatctagatccgtttctgaacgttcttctagt
gcagaatctgagagaagttacaagaagtcgaaaaaacacaagaagaagagcaagaagaga
agacataagtcagattcaccagaatcagatattgaacgagaaaaagacaaaaaagataga
gagtgtgaaaaggatagagctagacaaagatctgaatcaaaacataaatctcctactaaa
aaaagacctggaaaagattcaggcaactgggacacgtcgggcagcgagctgagcgagggc
gagctggagaagcagaggaggacgctgttggagcaactggatgaagatcaatga
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