Nothoprocta perdicaria (Chilean tinamou): 112947512
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Entry
112947512 CDS
T07556
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03250
Viral life cycle - HIV-1
npd03272
Virion - Hepatitis viruses
npd04144
Endocytosis
npd04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112947512 (VPS4A)
03272 Virion - Hepatitis viruses
112947512 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112947512 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
112947512 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112947512 (VPS4A)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112947512 (VPS4A)
Membrane trafficking [BR:
npd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
112947512 (VPS4A)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
Check point factors
Other check point factors
112947512 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_5
AAA_14
RuvB_N
IstB_IS21
DUF815
AAA_2
AAA_18
NPHP3_N
AAA_33
nSTAND3
AAA_17
RNA_helicase
AAA_24
PhoH
AAA_28
NACHT
ResIII
Mg_chelatase
Parvo_NS1
AAA_7
YhdB
bpMoxR
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-GeneID:
112947512
NCBI-ProteinID:
XP_025895404
Ensembl:
ENSNPEG00000005171
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MGKAIDLVTKATEEDKGKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLD
RAEKLKEYLRSKDKQGKKPVKEAQNDSKGSDSDSESENPEKKKLQEQLMGAIMMEKPNVR
WSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEAN
NSTFFSVSSSDLISKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRTENESEAAR
RIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFKL
HLGNTPHCLTEADVHELARKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRTN
PNVIVDDLLTPCSPGAPGATEMTWMEVPSDKLMEPIVCMSDMLHSLATTRPTVNTEDLLK
VKLFTENFGQEG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggccatcgacctggtgaccaaggccaccgaggaggacaagggcaagaactac
gaggaggcgctgcggctctaccagcacgccgtggagtacttcctgcacgccatcaagtat
gaggctcacagcgacaaggccaaggagagcatccgcgccaagtgcatgcagtacctggac
cgggcggagaagctgaaggaatatctgcgcagcaaggacaagcagggcaagaagcccgtc
aaggaggcccagaatgacagcaaggggagtgacagcgacagcgagagcgagaaccccgag
aagaagaagctgcaggagcagctgatgggtgccatcatgatggagaagcccaacgtgcgg
tggagcgacgtggccggcctggagggagccaaggaggccctgaaggaggctgtgattctg
cccatcaagttcccgcacttgttcaccgggaagcgcacgccctggcgcgggattctgctc
ttcgggccgcccggcaccgggaagtcctacttggccaaggctgtggccaccgaggccaac
aactccaccttcttctccgtgtcctcctccgacctgatatccaagtggctgggagagagc
gagaagctggtgaagaacctctttgagctggcacggcagcacaaaccctccatcatcttc
atcgacgaggtggactcgctgtgcggctcccgcaccgagaacgagagcgaggcagcgcgg
cgcatcaagacagagttcctggtgcagatgcagggcgtgggcaacagcagcgacggcatc
ctggtgctgggcgccaccaacatcccctgggtgctggactcggccatcaggagaaggttc
gagaagcgcatctacatcccgctgcccgaggaggcggcccgagcgcagatgttcaagctg
cacctgggcaacacgccgcactgcctcaccgaggccgacgtgcacgagctggcgcgcaag
acagacggctactcgggcgccgacatcagcatcatcgtgcgggacgccctcatgcagccc
gtccgcaaggtgcagtcggccacgcacttcaagaaggtgcgaggcccctcgcgcacgaac
cccaacgtgatygtggacgacctcctgacgccgtgctcgcccggggcccctggcgccact
gagatgacctggatggaggtgcccagcgacaagctgatggagcccatcgtctgcatgtcg
gacatgctgcactccctggccaccacgcgccccaccgtcaacaccgaggacctgctgaag
gtcaagttgttcacagagaacttcgggcaggaaggctga
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