Nothoprocta perdicaria (Chilean tinamou): 112948521
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Entry
112948521 CDS
T07556
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npd04121
]
112948521 (TOPORS)
03036 Chromosome and associated proteins [BR:
npd03036
]
112948521 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
npd03037
]
112948521 (TOPORS)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112948521 (TOPORS)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112948521 (TOPORS)
UBL E3 ligases
112948521 (TOPORS)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112948521 (TOPORS)
Cilium and associated proteins [BR:
npd03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112948521 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
112948521
NCBI-ProteinID:
XP_025896543
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MSLSEFEVDNSFSPKASTSKLHQTVPTDASPDSKCPICLDRFDNVAYLDRCLHKFCFRCV
QEWSKNKAECPLCKQPFHSIFHTVRAEDDFKEYILRPSENGSFASPDGRRFRYRTTLTRE
RRTSSYHHHTSSSRRTLSPPDNGILFEGLSSQPVRQRDGEIQQMIRRLASRRQASAEGRS
LRQIQEEDMINFRRALYRTGVRVRSVQDGGRYRDISAEFFRRNPACLHRLVPWLKRELTV
LFGAHGSLVNIVQHIIMSNVTRYDLESQAFADDLKPFLLNRTEHFLHEFVSFARCPFNLE
AYDQHANYDCPAPSYDDGSHSDSSIITISPDEADSQGPDHSSSVTGIDQAPWDDETPGPS
YSISEEVHATITSSLETSESSDEDSTTKRTEMQTQLQANVDSNDSDSSSDNCVIVGYVKP
IAERTPELVELSSDSEKSVKEERREDVKKQQPMQFHSCSDSEQSRSSSPHSPTYNENLGS
CKSCFSPAAEKMESKDDENKSKIKNLSAEQMIWSPSSGRDRMRSPRDHRLPRKRKSKSPQ
SYSKRSRGSLGHRSRREHHSKDRLKRKRSGSRDSSKHRSKRNKRRSRTRDSSISRKSQRG
SLSRESTVSREVSRSRSRSKGHSKRRSRSRDSDHYYVRNNYQSRYQWGYTFYSRNVVGDG
YESSYRRKTQSRAHYSRQSPSPEYRIQSFTERTDPCSQRGLHERHYYYYERCRSRSRSSN
RSKTPSGGTDRMKSEKPSGKRKYKTRHLETADKESTVLEKENAPKKTLSKFSDCYKNENS
LSDNQGCSETKYKKKKKKTRSPSVEIVFEGKVTDTMRHHKKKKKKHKKKHRKHHLSNSVH
SSPVVITIDSDSDKEPESIECDSSITWTGSTQINERESESLSSFLGETECKDVYKVSNKT
GVMDKNCSTATTREDLDDDFRNSDVEVQETSADQNLAPVDHSSNTACTGITTSHAQRMQA
AASSQLPPPRTSFLENPERPPLILRLPKRLVNRSFWSDSAEKNM
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatcagagtttgaagtggataacagcttctcaccaaaagctagtacaagcaag
ctgcatcagacagtgccaacagatgcatctcctgactccaaatgccctatctgtttggac
agattcgacaatgttgcctatctagatcgttgcttgcataagttctgttttcgttgtgtc
caggaatggtcaaaaaacaaggcagaatgcccactgtgcaaacaacctttccattccatt
ttccatacagttcgtgctgaggatgacttcaaggagtacatactcagaccatcagaaaac
ggctcttttgccagcccggatggccggagatttcgttatcgtactacgttaacaagggaa
cgtcgcacttcatcttaccatcatcacacatcctcttctcgaaggacgctgtcccctccy
gataatgggatattgtttgaaggactgtcaagccagccagtgcggcagagagatggggag
attcagcagatgatacggaggcttgcctcaaggaggcaagcaagtgcagagggcaggtct
ctgcggcagattcaggaggaggacatgatcaacttccgcagagctctctatcgcactggt
gtgcgtgttcgtagtgttcaggacggtggccgctatcgagatatttcagcagagtttttc
cgtcggaatcctgcctgcctccacaggttggttccctggttgaagcgggaacttacagtc
ctgtttggtgcccatggatctttggttaacattgtacagcatatcatcatgagtaatgtg
acaaggtatgatctggaaagccaggcctttgctgatgatttaaagccatttttgctgaat
cgtaccgaacatttcctacatgaatttgtcagttttgcccgatgtccttttaacctagag
gcatatgaccagcatgccaattatgactgtcctgctccatcatatgatgatggaagtcac
tcggattcatcaattattacaatatctccagatgaagcagattctcaaggtccagatcac
agttcatctgtgactggtatagatcaagctccctgggatgatgaaacaccagggccctct
tattccatctcagaagaggttcacgcaaccatcacttcttctttggagacttcagaaagt
tctgatgaagactctacaacaaaaagaactgaaatgcaaactcagttgcaggctaatgtc
gattcaaatgacagtgactcttcttccgacaactgtgttattgttgggtatgttaagcct
atagctgagaggacaccagaactggttgaattgtcttcagattctgagaaatcagtcaag
gaagagagaagggaagatgtgaagaaacagcagccaatgcaatttcacagttgcagtgac
agtgaacaaagcaggagttcctcaccacactcccctacatataatgaaaacctaggaagc
tgtaaaagctgtttctcccctgcagctgagaagatggagtcaaaagatgatgagaacaaa
agtaaaataaaaaatttatctgcagagcaaatgatctggagcccttcctcaggaagagac
aggatgcgttcacctcgtgatcacagactgcccagaaagagaaagtccaagagtccacag
tcctattcaaagcgaagcagaggaagtcttggccacaggagtaggagggagcatcacagc
aaagaccgtcttaaaaggaaacgatcaggaagcagagatagtagcaaacatagaagcaaa
agaaacaagaggaggtcaagaactcgtgattctagcatctctcgaaaaagccagagaggc
tctctcagtcgtgagagtactgtatccagagaagtaagcagatcacgatcccggagcaaa
ggccatagcaaaagaagatcgagaagtagagacagtgatcattattatgtaaggaacaac
tatcaaagtagataccaatggggttacactttttatagtcgaaatgtggttggagatggc
tatgaatcctcttacaggaggaagactcagtctagagctcactattcaagacaatctcct
agtccagaatacaggatacaatcctttactgaaaggacagatccatgtagtcagagagga
ctccatgagagacattattactattatgaaagatgcaggtccaggagtcgatcaagtaat
aggtccaagaccccatctggagggactgacagaatgaaaagtgaaaagcctagtggaaaa
aggaagtataaaacccgtcacttggagactgcagacaaggagagtacagttctagagaaa
gagaatgcccccaagaaaactttatcaaaattcagtgactgctacaaaaatgaaaatagc
ctttcagacaaccaagggtgtagtgaaacaaagtataagaagaaaaagaaaaagacaagg
agtccaagtgtggagatagtttttgaaggaaaagtaacagacacaatgagacatcataaa
aagaaaaagaaaaagcacaagaagaagcaccggaaacaccacttgagtaactcagtacat
tcttctccagtcgtgattacaattgatagtgatagtgacaaggagccagaaagtattgag
tgtgacagtagtattacttggacaggctcaacccagataaatgagagggaaagtgaatct
ctctcttcttttctgggagagacagaatgtaaagatgtttataaggtcagcaacaaaact
ggagtaatggataaaaactgcagtactgctaccacaagagaggacttagatgatgacttt
agaaatagtgatgttgaggttcaggaaacttcagctgatcagaatcttgcaccagtggat
cacagtagcaatacagcttgcacaggaattacaactagccatgctcaacgaatgcaagcc
gcagcatccagtcaactgcctcctcccaggacttcctttttagagaatccagagagacca
ccattgatactaagactcccaaagagacttgtcaacagatccttttggtctgactctgca
gaaaaaaatatgtag
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