Nothoprocta perdicaria (Chilean tinamou): 112948860
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Entry
112948860 CDS
T07556
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npd03009
]
112948860 (IGHMBP2)
03012 Translation factors [BR:
npd03012
]
112948860 (IGHMBP2)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112948860 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
112948860 (IGHMBP2)
Ribosome biogenesis [BR:
npd03009
]
Eukaryotic type
Other ribosome biogenesis factors
112948860 (IGHMBP2)
Translation factors [BR:
npd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112948860 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
Viral_helicase1
nSTAND3
Helicase_RecD
AAA_22
DEAD
AAA_16
Flavi_DEAD
SLFN-g3_helicase
AAA_25
UvrD-helicase
ResIII
AAA
IstB_IS21
T2SSE
PhoH
ABC_tran
DAP3
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
112948860
NCBI-ProteinID:
XP_025896977
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MAAAAAARRQLELLREEREAELAQSRTWQEGVSPRELQRRGLCLLGLRAAAQSTGLYGRL
LVTFEGRAGAPGAPLPXHXLGHGDIVALHEGSGPGAALATGVVTRVAASTVTVAFEEARE
GLPSVGHEGSYRLLKLANDVTYTRMKRALIALSQYHSGPASGLIDVLFFSSEPSTFSETG
PLVLQDTALDASQREAVSFALAQRELAIIHGPPGTGKTTTLVEIVLQAVQRGLKVLCCAP
SNVAVDNLAERLAGRGARLVRLGHPARLLEPLQRHALDAVLARGDGARLLADIRRDIDQA
LAKSKKAQDKGERSHFLNEIKLLRKELKEREEAAMTAALTHASVILATNTGASSDGPLKV
LPEGHLDVVVLDECAQALEASCWIPLLRAPKCVLAGDHKQLPPTIVSHKAAAGGLSRSLM
ERLVERCGAAATRMLTVQHRMHEDIMRWASDEMYGGRLRAHPAVAHHLLRDLPGVAATED
TSIALLLIDTAGCGLFELEEGDEQSKGNPGEVQLAGLHVQALLEAGVKARDVAVVAPYNL
QVDMLREHLCHRYPELEVKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEERRVNVAVTR
ARRHVALLCDSRTVGTQPFLRRLVDHFGRHGEVRSAFEYLPDLVPHNYSHKGRGEPKPKX
KAKAHPARPARQPRAAPSKPASAEPEPRMPEPEQRVPESAEPEQRALESSTEPESGAEEL
RATLAAFARGAAAELTFPASLSPRQRLLVHLAAEELGLQHQSSGQGRHRRVTVRKGPPHG
PAQQPPPPGSPAASPTEEAASPTEEAAGPTEETAGPTETEAGSGKASVPTVDLKSLHMER
VQREKARAAREPRAGPPSGSRRKDRCPGKGTPSGAAPEDVDALIAAAVKADGTCGFARCA
ASVATLGQRCPHCARRYCLRHHVPEVHGCGEAAKGHARQRRPAEKPLDAAARAQLQRRLD
RKLSELSGQRRSKRKDKEK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcgcggcggcagctggagctgctgcgggaggagcgcgaggcg
gagctggcgcagagcaggacgtggcaggagggcgtctcgccgcgggagctgcagcgccgc
gggctctgcctgctggggctgcgcgcggccgcccagagcaccggcctctacggacgcctg
ctcgtcaccttcgagggccgcgcsggcgcccccggcgcccccctgcccrcacacrccctc
gggcatggggacatcgtggccctgcacgagggctcggggccgggcgccgcgctggccacg
ggcgtcgtgacgcgcgtcgccgcctcgaccgtcaccgtggccttcgaggaggcccgcgag
gggctgcccagcgtgggccacgagggctcctaccgcctgctcaagctggccaacgacgtc
acctacacccggatgaagagggctttgattgcactaagtcaataccacagcggtccagcc
tctggcctgattgatgtcctcttcttttcttcagagccaagcaccttcagtgaaacaggg
ccrctggtgctgcaggacacggcgctggacgcctcgcagagggaggctgtgtccttcgcg
ctggcgcagcgggagctcgccatcatccacgggccgcccggcaccggcaagaccaccacg
ctygtggagatcgtcctgcaggccgtccagcgaggcctcaaggtgctgtgctgcgcgccg
tccaacgtggccgtggacaacctggcggagcggctggcgggccgcggcgcccgcctcgtg
cgcctgggccaccccgcgcgcctcctggagccgctgcagcggcacgcgctggacgcggtg
ctggcgcgcggggacggcgcccgcctcctcgccgacatccgcagggacatcgaccaggcc
ctcgcaaaatccaagaaggcccaggacaagggagaacggagccactttctcaatgagata
aagctgctgagaaaggagctgaaggagcgagaagaagctgccatgaccgcagcccttacc
cacgccagcgtcatcctcgcgacgaacacaggcgcctcragcgacggccccctgaaggtg
ctgcccgaggggcacctggacgtggtggtgctggacgagtgcgcgcaggcgctcgaggcc
agctgctggatcccgctgctgcgcgcgcccaagtgcgtcctggccggcgaccacaagcag
ctgccgcccaccatcgtctcgcacaaggcggccgccgggggcctctcgcggagcctcatg
gagcggctggtggagcgctgcggcgcggcggccacgcgcatgctcaccgtgcagcaccgc
atgcacgaggacatcatgcgctgggcctcggacgagatgtacggcgggcgcctgcgcgcg
caccccgccgtggcacaccacctgctcagggacctgccgggcgtcgcggccacggaggac
acctcgatcgccctgctgctcatcgacaccgccggctgcggcctcttcgagctggaggag
ggagacgagcagtccaagggcaacccaggcgaggtgcagctggccgggctgcacgtgcag
gcgctgctggaggccggcgtgaaggcgcgggacgtggccgtggtggcgccctacaacctg
caggtggacatgctaagagagcacctctgccacaggtaccccgagctggaagttaagtcg
gtggacggtttccaggggcgagagaaggaggccgtgatcctgtccttcgtgcgctccaac
aggaagggcgaggtcggcttcctggccgaggagcggcgcgtgaacgtggcggtgacgcgc
gcccggcgccacgtggccctgctctgcgactcgcgcaccgtgggcacccagcccttcctg
cggcgcctcgtggaccacttcgggcggcacggcgaggtgcgctccgccttcgagtacctg
cccgacctcgtgccgcacaactactcgcacaagggccgcggagagcccaagcccaagscc
aaggccaaggcgcatccagcacgtccggcacggcagccccgcgcggcacccagcaaacct
gcctcggctgagccggagccgcgcatgccagagccggagcagcgtgtgccggagagcgcg
gagccggagcagcgcgcgctggagagcagcacggagccggagagcggcgcggaggagctg
cgggcgacgctggcggcgttcgcgcggggcgccgcggccgagctcaccttccccgcctcg
ctcagcccgcgccagcgcctgctcgtgcacctggcggccgaggagctggggctgcagcac
cagagcagcggccagggccggcaccgccgcgtcaccgtgcgcaaggggccgccccacggc
cccgcacagcagccaccccctcctgggtccccggctgccagccccacggaggaggctgcc
agccccacagaggaggctgctggccccacagaggagactgctggccccactgagactgag
gcgggaagcggcaaggcctctgtcccaaccgtggacctcaagtctttgcacatggagcga
gtgcagcgggagaaggcgagggcggcgcgggagccacgggctggccccccaagtggcagc
aggagaaaggaccggtgcccaggcaagggcacgccgagcggcgccgcgccggaggacgtc
gacgcgctcatcgcggcygccgtcaaggccgacggcacctgcggcttcgcccgctgcgcc
gccagcgtcgccaccctgggccagcgctgcccccactgcgcccggcgctactgcctgcgc
caccacgtccccgaggtccacggctgcggggaggcggccaagggccacgcgcggcagcgg
cggccggcggagaagcccctggatgcggccgcgagagcccagctgcagcggcgcctggac
agaaagctcagcgagctgagcggccagcgaaggagcaagaggaaggacaaggagaagtga
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integrated database retrieval system
