Nothoprocta perdicaria (Chilean tinamou): 112949016
Help
Entry
112949016 CDS
T07556
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03013
Nucleocytoplasmic transport
npd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112949016 (CASC3)
03015 mRNA surveillance pathway
112949016 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112949016 (CASC3)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112949016 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
112949016
NCBI-ProteinID:
XP_025897173
Ensembl:
ENSNPEG00000010077
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASESAGSAESEDGIEGDAVLSDYESAEDSEAEEEDYSEEE
SAKVELKQDSNDSCESAAKAEKGDEKHDSKGAVTGERQSGDGQESTEPVENKVGKKVPKH
LDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQA
PKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPSWPNERPNKAGRAAPESA
CAAPRAFGSRSPGGAGRAPPGRSRPGAYKESRPGYRAPESSGPHLSRSGEQAKQESGYRG
KRGEQSAARDESPETEAAPAHGGPGRDEVALESQGAGADAAQPPPDRPVEKKSYSRARRT
RIKAGDAGKLAEEIPASEGLAPAPPKPVQVEASPPPAKSSNWESPVESSLDGLEQEMTQM
SLTEQSWSPGQSQFMQSRELRGIPNHVHVGSGPPPPQFNRMEEMAVQGGRVKRYSSQRQR
PPVPEPGPAMHISIMEGHYYDPLQFQGPIYAHGENPAPLPPQGMIVQPEMHLPHPGLHPH
QTAAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPP
HLYPNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDGKSEKSKERSN
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcgtccgagagcgccggctcggccgagagcgaggatggcatcgaaggagacgccgtgctc
tccgattacgaaagcgccgaggactcggaggcagaggaagaggattacagcgaggaagaa
agcgccaaggtggaattgaagcaggatagcaacgattcctgcgaatctgcagcaaaagca
gagaaaggggatgagaaacatgactccaaaggcgctgtgaccggcgagaggcagagcggg
gacgggcaggagagcactgaacccgttgagaataaagtggggaaaaaagttcccaagcac
ctggatgacgatgaggatcggaagaacccggcctacatcccccgcaaggggctcttcttt
gagcacgacctccgagggcagactcaggaggaggaggtcaggccgaaagggcggcagcgg
aagctgtggaaagacgagggccgctgggagcacgacaaattccgggaggacgagcaggcc
cccaagaccaggcaggagctcatcgccctctacggctacgacatcaggtcggcccacaac
cccgacgacatcaagccgcggaggatgcgcaagcccaggttcgggagtcctcctcagcga
gacccaagctggcccaacgagaggccgaataaagcgggcagagcggcgccggagagcgcg
tgcgcggcgccgcgcgccttcggcagcaggagccccggcggcgcgggcagagcgcccccg
ggcaggagccgcccgggcgcctacaaggagagccgcccgggctaccgggcccccgaaagc
agcggcccgcacctctctcgcagcggggagcaggccaagcaggagagcggctaccggggc
aagcgcggggagcaaagcgccgcgcgagacgagtcccccgagacggaggcggcccccgcg
cacggcggcccgggcagggacgaggttgctttggaaagccagggcgcgggcgctgacgcg
gcgcagccgccgccggacaggccggttgagaagaagtcttattcccgggcgaggaggacc
aggattaaagctggggatgcgggaaagctggcggaggagattcctgcttcggaagggctg
gcgcctgcgccgccaaaaccagtccaagtggaggcatcccccccaccagccaagagcagc
aactgggagtcgcccgtagaatccagcttggatggactggagcaagagatgacacaaatg
agtctcaccgagcagagctggagcccggggcagtcgcagttcatgcaatcccgggagctg
aggggtattcccaaccatgtgcacgtggggagcgggccgccgccgccgcagttcaacagg
atggaggaaatggccgtgcaggggggccgcgtgaaacgctactcgtcgcagcggcagcgg
ccgcccgtgccggagcccggccccgccatgcacatcagcatcatggaagggcactactac
gacccactacaattccagggaccaatctacgcgcacggcgagaaccctgccccgctgcct
ccccagggcatgatcgtgcagcccgaaatgcacctccctcatccaggtttacatccccac
cagaccgcggcccccatggccaaccccgggctctaccctcctcccgtctccatgcctccg
ggtcagccgcctccgcagcagctactggcgccgacttatttctcccctcctggagtcatg
aattttgggaaccctggctacccttacccgccgggagcgctgcccccgccgccccctcct
cacctctatcccaacacacaggcccagtcccaggtgtacggcggcgtcacctactacaac
acggtccagcagcaggtgcagcccaagccctccccgccgcgacggacgtcccagcccgtg
accatcaagccgccgcctcccgaggacggcaaaagcgagaagtccaaggagaggagcaac
acgtag
DBGET
integrated database retrieval system
