KEGG   Nothoprocta perdicaria (Chilean tinamou): 112949223
Entry
112949223         CDS       T07556                                 
Symbol
GTF2H4
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 4
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
npd  Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03022  Basal transcription factors
npd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:npd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112949223 (GTF2H4)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112949223 (GTF2H4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npd03021]
    112949223 (GTF2H4)
   03400 DNA repair and recombination proteins [BR:npd03400]
    112949223 (GTF2H4)
Transcription machinery [BR:npd03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     112949223 (GTF2H4)
DNA repair and recombination proteins [BR:npd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     112949223 (GTF2H4)
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 112949223
NCBI-ProteinID: XP_025897389
Ensembl: ENSNPEG00000008644
LinkDB
Position
Unknown
AA seq 361 aa
MGGGNNGASRPLGPLLKGRRRGKSWWDDTSQLGPDRHARDVPALDKYAEERWEVILHFMV
GSPSAAVSQDLAQLLVQAGLMRSDGGDAPSITSAGFRFLLLDTPAQLWLCVLHYLRGAQA
RGLDLVEILSFLFQLSFSTLGKDYSVEGMSDSLLTFLQHLREFGLVFQRKVTXRGHGGXE
GMGDGVDTRGTQGDVRDMGVQGGVPVPTVSPLSPHCPPDSELQVALIALFSELLYRFPNL
VVAQVTRDSVQAAIANGISADQIIHFLRTRAHPVMAKQNPVLPPTITDQIRLWELERDRL
RFSEGVLYNQFLSQGDFEVLRGHARALGVLVFEHPAKRLLVVTPAGHPDVKRFWKRQKQS
T
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgggggggggaaacaatggggcctcccgtccgctggggcccctcttaaagggccggcgc
aggggcaagtcgtggtgggacgacacgagccagctgggccccgaccggcacgcgagggac
gtccccgcgctcgacaagtacgcggaggagcgctgggaggtcatcctgcacttcatggtg
gggtccccgagcgccgccgtgagccaagacctggcccagctgctggtgcaggccgggctc
atgcgcagtgacgggggcgatgctccctccatcacctcggccgggttccgcttcctgctg
ctcgacacccccgcccagctctggctctgcgtcctgcactacctgcggggcgcgcaggct
cgcggtctggacctcgttgagatcctctccttcctcttccaactcagcttctccaccctg
ggcaaggactactcggtcgaggggatgagcgactccttgctgaccttcctgcagcatctg
cgcgagtttgggctggtcttccagaggaaggtgacatgacggggacacgggggataggag
ggcatgggggatggggtggacacaagggggacacagggggacgtgagggacatgggagta
caggggggtgtccctgtccccaccgtgtccccactgtccccgcattgtcccccagactcg
gagctgcaggtcgccctcatcgcgctcttctcggagctgctctaccgcttccccaacctg
gtggtggcccaggtgacaagggacagcgtccaggccgccatcgccaatggcatcagcgcc
gaccagatcatccatttcctgcgcacccgggctcaccccgtcatggccaagcagaaccca
gttctgcctccgaccatcacggaccagatccggctgtgggagctggagcgggaccggctg
cgcttctccgagggcgtcctctacaaccagttcctgtcgcaaggcgacttcgaggtgctg
cggggccacgcacgggcgctcggcgtcctcgtcttcgagcacccagccaagcggctgctg
gtggtgacgcccgcaggacacccggacgtcaagcgcttctggaagcgccagaagcagagc
acgtag

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