KEGG   Nothoprocta perdicaria (Chilean tinamou): 112949373
Entry
112949373         CDS       T07556                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
npd  Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03082  ATP-dependent chromatin remodeling
npd03083  Polycomb repressive complex
npd04110  Cell cycle
npd04330  Notch signaling pathway
npd04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:npd00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112949373
   03083 Polycomb repressive complex
    112949373
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    112949373
   04350 TGF-beta signaling pathway
    112949373
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112949373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npd03036]
    112949373
Enzymes [BR:npd01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112949373
Chromosome and associated proteins [BR:npd03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     112949373
   HDAC complexes
    Sin3A-HDAC complex
     112949373
    BRAF-HDAC complex
     112949373
    REST complex
     112949373
    SHIP complex
     112949373
    MiDAC complex
     112949373
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     112949373
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112949373
  Chromatin remodeling factors
   NuRD complex
    112949373
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112949373
NCBI-ProteinID: XP_025897550
Ensembl: ENSNPEG00000004676
LinkDB
Position
Unknown
AA seq 458 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD
RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV
HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED
KKETEDKKADVKEEDKSKDSSGEKTDTKGAKSEQLSNP
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaaacctcataggatccgaatgactcacaacttgctgctaaattatggcttgtacaga
aaaatggaaatttatcgaccccacaaagcaactgctgaagaaatgaccaagtaccacagt
gatgaatacatcaaatttctccgatcaataaggcctgacaatatgtccgagtacagcaag
cagatgcagagatttaatgttggagaagattgtcctgtatttgatggcctgttcgagttt
tgtcagctgtcaactggaggctctgttgctggggcggtaaaattaaacagacaacagaca
gatatggctgttaattgggctggaggacttcatcatgccaagaagtcagaggcatctggt
ttctgttatgtcaatgatattgtgcttgctatccttgagttactgaagtatcaccaaaga
gtgttatatattgatattgatatccatcatggtgatggtgttgaagaagcattttatacc
acagatcgtgtcatgacagtatcattccataagtatggtgaatattttccaggcacaggg
gaccttagggacattggtgctggaaaaggcaaatactatgctgtcaattttccaatgagg
gatggtatagatgatgaatcatatggacaaatatttaaaccaattatatccaaagtaatg
gagatgtatcagcctagtgctgtggtactacagtgtggagcagattcattgtctggtgac
agactgggatgctttaatcttactgttaaaggtcatgctaaatgtgtggaagttgtgaag
actttcaacttgccattgctcatgttaggaggaggaggatataccattcgtaatgttgct
cgatgttggacttacgaaactgctgttgccttagattgtgaaattcctaatgagttgcca
tacaatgactactttgagtattttggaccagacttcaaacttcatattagtccatcaaat
atgactaaccaaaatacaccagaatatatggagaagatcaagcaacgcttatttgaaaac
ttgcgtatgttacctcatgcacccggtgtgcagatgcaagccattcctgaagatgccgtc
catgaagacagtggagatgaggatggagaagatccagacaaacgcatttctattcgagca
tctgataagcgtatagcctgtgatgaagaattttctgattctgaagatgaaggagaaggy
ggacgacgaaatgttgcagatcataagaaaggagcaaagaaagctagaatagaagaagac
aagaaagagacagaggacaaaaaagcagatgttaaggaggaggataaatccaaggacagc
agtggtgaaaagacggacaccaaaggagcgaagtcagaacagctcagcaacccttga

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