Nothoprocta perdicaria (Chilean tinamou): 112949618
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Entry
112949618 CDS
T07556
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112949618 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112949618 (PRPF6)
Spliceosome [BR:
npd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112949618 (PRPF6)
Complex C
U5 SnRNP specific factors
112949618 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
T7SS_EccA1_N
ARM_TT21_5th
TPR_21
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
112949618
NCBI-ProteinID:
XP_025897846
Ensembl:
ENSNPEG00000009280
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELAEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLTVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQQEVKKR
CENAEPRHGELWCDVSKDIANWQKKIGEILVLVAAKLKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggctacgtgccgggg
ctgggccgcggagccacaggtttcaccacccgctccgatatcggccccgcgcgcgatgcc
aacgaccccgtggacgaccgacatgcgccgccgggcaagagaaccgtgggcgatcagatg
aagaagaaccagacggctgatgacgacgacgaagacctgaacgacaccaattacgacgag
ttcaatggatacgcggggagcctgttctcaagcggtccctatgaaaaagacgatgaggaa
gcagatgctatttatgcagctttggataaaaggatggatgaacggaggaaagaaagaagg
gaacaacgagagaaagaggagatagaaaaataccgtatggaacggcccaaaattcagcag
cagttctcagacttgaaaaggaaactagcagaagtcacagaagaggaatggctaagtatt
cccgaagttggggacgccaggaacaagcgtcagaggaatcctcgttacgagaagctgact
cctgtacccgatagcttctttgcaaagcacttacagtcgggggagaatcacacctctgtg
gacccccgccagacgcaatttggtggcttgaatactccatatccggggggcttgaatact
ccttatccgggaggaatgacaccaggcttaatgacacctgggacaggtgaattggatatg
aggaagattggtcaagcaagaaacaccttgatggatatgaggctaagccaggtgtccgac
tctgtgagcggccagactgtagtggatccaaaaggatatctgacagacttgaattcaatg
atccccactcacggaggagatatcaatgatatcaagaaggctcgattgctgctcaagtct
gtccgggagaccaatccccaccacccgccagcctggatcgcgtcagcccgactggaggag
gtcactggcaagctccaagtcgctcggaacctcatcatgaaaggaacggagatgtgcccc
aagagtgaagatgtttggttagaagctgctcggttgcagcctggggatacggcgaaggcc
gttgtggcccaagctgtccgccacctcccacagtctgtccgcatatayataagagcagcg
gagctggagacagacatccgtgcaaagaaacgtgtcctcaggaaagctctggagcatgtt
ccaaattcggtgcgtttgtggaaggcagcagtggagctggaagaacctgaggatgccagg
atcatgctgagtcgggctgtggagtgctgtccaactagtgttgaactttggcttgcgctg
gcaagactggagacttatgagaacgctcgtaaagtcctaaacaaagcccgggagaacatt
ccaacagatcgtcacatctggattacggcggccaaactggaggaggccaatggaaacact
cagatggtggagaaaatcatcgacagagccatcacatccctcagagccaacggtgtggaa
atcaacagggagcaatggatacaggatgctgaggaatgtgataaagctggaagtgtggcc
acatgccaggcgatcatgagagctgtcattgggattggaattgaggaagaagatcggaaa
cacacctggatggaagatgcagacagttgtgttgctcacaatgctttggagtgtgcccga
gcaatttatgcttacgccttgcaagttttcccgagcaagaaaagtgtgtggctgcgagca
gcttactttgagaagaaccacgggaccagggaatccttggaggccctgctgcagagagcc
gtcgcgcactgccccaaagcagaagtgctctggctcatgggagccaagtccaagtggctg
gcgggagatgtgcccgcagccagaagcattttggccctggctttccaggccaaccccaac
agcgaggagatctggctggctgccgtgaagctcgagtcagaaaacaatgaatatgaaaga
gcaaggaggctgctggcaaaagctcgcagcagtgcccccactgcacgggtcttcatgaag
tctgtgaagttagagtgggtgcttggaaacattgctgcagcccaggagctctgcgaggag
gccctgaagcactatgaggacttccccaagctgtggatgatgaaaggacaaatagaggaa
caaaaagagctggcagagaaagcacgggaagcttataatcaagggttgaagaagtgtccc
cattccatacccctatggctcttgctatccagactggaggagaaagttgggcagttgact
agagcaagagccatcttggaaaagtctcgtctgaaaaacccaaagaatcctgatctctgg
ttagagtctgtacgattagaatacagagctgggttaaagaatattgcaaatactctgatg
gccaaggcattgcaagaatgtcccaattcaggaatcctgtggtcagaggcaattttcctg
gaagcacgaccgcaaaggaagaccaagagcgtggatgctctgaagaagtgcgaacacgac
ccgcatgtcctgttgactgtggccaagttattctggagtgagcgcaaaataactaaggcc
cgagaatggttccaccgaacagtgaagatagactccgacctgggggatgcctgggctttc
ttttacaaatttgagctccagcacggcacagaggagcaacaacaggaggtgaagaagcgc
tgcgagaatgccgagccgcgccacggagagctctggtgtgatgtctccaaggacatagcg
aactggcagaaaaagatcggcgagatccttgtccttgtggcagccaagctcaaaaatact
ttctag
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