Nothoprocta perdicaria (Chilean tinamou): 112949671
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Entry
112949671 CDS
T07556
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npd03000
]
112949671 (SOX18)
Transcription factors [BR:
npd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112949671 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112949671
NCBI-ProteinID:
XP_025897906
Ensembl:
ENSNPEG00000009440
UniProt:
A0A8C6ZED3
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MNISESNYCREEIPQPRGDCSWASAAEAGLAFARPPRAASPASRTPSPEPGFAFGAGGGG
AAPGAAPSRSPSPEAGYGYSPPGGRAEGKAGEDSRIRRPMNAFMVWAKDERKRLAQQNPD
LHNAVLSKMLGQSWKALSASDKRPFVEEAERLRIQHLQDHPNYKYRPRRKKQAKKIKRME
PNILLHNLSQPCSDNFSMSHHGGSQPGHPQPPPLNHFRELHSMGSDIENYGLPTPEMSPL
DVLEQTEPAFFPPHMQDDCNMMPFRGYHHHHQLEFPQEKCLGRDVPVPYAQTPSHLADAM
RTPHPSSIYYNQMCPGAQGGLSAHLGQLSPPPEGHHLESVDHLNQSELWTDVDRNEFDQY
LNMSRTRPESSALPYHVSLSKVTPRSISCEESSLISALSDASSAVYYSPCITG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagtcaaactactgccgagaggagataccgcaaccgcggggcgactgt
tcctgggcgagcgccgccgaggccgggctcgccttcgcgcggccgccgcgcgccgcctcc
ccggccagccgcacgcccagccccgagcccggcttcgccttcggtgccggcggcggcgga
gcggcccccggcgcggcccccagccgctcgcccagccccgaggcgggctatggatacagc
cccccgggcgggcgcgccgagggcaaggcgggcgaggactcgcgcatccgccggcccatg
aacgccttcatggtgtgggccaaggacgagcgcaagcggctggcgcagcagaaccccgac
ctgcacaacgccgtgctcagcaagatgctgggccagtcgtggaaagcgctgagcgccagc
gacaagcggccctttgtggaagaggccgagaggctgcgcatccagcacctccaggatcac
cccaactacaagtaccgcccgaggagaaagaagcaagccaagaaaatcaagaggatggaa
cccaacatcctcctccataacctttcccagccttgcagcgacaacttcagcatgagtcac
cacggcggcagccagccgggccacccccagcctcccccacttaaccacttcagagaactc
cactccatggggtcggatattgaaaactatggcttgccaactcccgagatgtcgcccttg
gatgtcttggaacagacggagccggcgtttttccctccgcacatgcaggatgactgcaac
atgatgccctttcgcggctaccaccaccaccaccagctggagttcccgcaggagaagtgc
ctgggccgggacgtgccggtgccctacgcgcagaccccctcgcacttggccgatgccatg
aggactccgcacccgtccagcatttactacaaccagatgtgcccgggggcgcagggcggc
ctctcggcccacctgggccagctctcgccgccccccgagggccaccacctggagagcgtg
gaccacttgaaccaaagcgagctctggacagacgtcgaccgcaacgagttcgaccagtat
ttgaacatgagcaggactcggccggagagctcggcgctcccttaccatgtgtccctgtcc
aaagtgactcccaggagcatctcctgcgaggagagcagcttgatatccgccctgtccgat
gccagcagcgctgtctactacagcccctgcatcaccggctag
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