Nothoprocta perdicaria (Chilean tinamou): 112949794
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Entry
112949794 CDS
T07556
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
NDNF
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
112949794
NCBI-ProteinID:
XP_025898038
Ensembl:
ENSNPEG00000009530
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MQIPTCCXFACLAVVSHVWGRVSSQGSGRLKLTVLSEDRLQMKWKETEGSISGYKVRVKP
MAGDSEQEVMLKTKTPKATVAGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQT
RNSRRHSGTLSEKNLTSPGSSAAEQDSTSEATSPPLTAILTQTAKDRTEKKRQKGSHPKV
SGEAMRNRPSAEASVTEATGTSTKSPQRTPASVGRESLGKEKPTKDSLKRGSQFQCDTSA
MIDIVLLVDGSWSIGRNNFKLIKEFLSTLISPFSIAQDKIRVGLSQYSSDPRTEWDLNTY
TTRDEVLEAVRNLRYKGGNTFTGLALTHVLEQNLKPESGARLEAGKLVVLLTDGKSQDDA
NLVAQTLKNMGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVGRLARVLC
ARIKEKRSSESPGSIPVNLSPQLSPSDLKISAVTSNSMHLTWSPPLRPPKKYRIVYYPSR
GGVPKEVLLDGAISSLQLANLTSHTEYLVSVSALYDTGVGDSLRGITSTLPLSPAGSLRV
SELSHKSMRLSWRAAPGATHYLVLCSAAPRGXEDYTVEVKVAQPEVLLDGLSPGTEYSVA
VYAMYGEEASEPASIQETTLPLSPPRSLSFSEISHASVRVSWEAASGAAKAHRVSYVPSK
GSSAAEIEVPGTASSTVLRPLSSLTQYFISVRSMYDEGDSFPVTGNVTTLKVPPPRALKV
TELSGNSLQLQWEAVAASDVVVYQIRWSPLGGEKAQELSVAGNVATAILPSLQKDTDYRI
SMWAYYKDGARSDTVSVQHRTNSRNPPTNLFIDSETPTSLQVRWDPPDGRVQHYKIVYSP
VSDSRAQQTVMASGKSSSVTLQSLLPDRAYKVTVSAVHNTGESESRTTTGRTAPVLSKHP
SIRGFVPSKAEACPTISSPEGSVRGFDMMEVFGLVEKEYASIKGVAMEPFVFSGSRTYTL
FKDIQLTQRTSDVHLFAIPPEHTIIILLRLLPDTSKEPFAVWQITDEDFQPLLGVILDSS
KKSLTYFNHDYKADLQEASFDQQEVKKIFYGSFHKVHVAVSHFKVKLYLDCKKIAEKPVN
TMGSISTAGFVMLGKVTRTRGPRSGSTSFQLQTLRIVCNSLGAEEDRCCDLPALRDEETC
PTLAPACTCTSGLPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPSGQQG
SPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAGP
PGPPGPRGFQGXTGSRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVNQAC
ERMIQTHVLKFDSFIHEHARKPVPVWEAKLKPGEPGPPGPPGPPGSNGERGENGIPGQPG
KDGYPGERGAPGPKGEKGTSGANEEGMQGPRGRTGPPGEIVLGKPGPKGSPGNAGPQGFP
GIRGHAGQPGYPGGCDISGCYGTGRRDFIP
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcccacttgctgcktttttgcctgcctggctgtggtgagtcatgtctggggc
cgagtgagcagccaaggatcaggtcgactgaagctcacggttctttcggaagacaggctc
caaatgaaatggaaggaaaccgaagggagcatcagtggctacaaagttcgggtgaagccc
atggcaggggactcagagcaagaagttatgctgaaaaccaagactcccaaagccacagtt
gcaggactgagtcctacgaaggaatacacattgcaagtctatgtgcttaatggctcccag
gaagccctgtttgccaaaaggaaattcgtgattgaggagctcaaaaatgcatcccagact
aggaacagccgaagacactcaggaaccctttcagaaaagaatcttacatctccagggagt
tcagcagctgagcaggattcaacatcagaggccacgtcaccacctctgactgcgatcttg
acacagacagcaaaggacagaactgagaagaaaagacagaaagggagtcacccgaaggtc
tctggtgaagccatgagaaaccgacccagtgctgaggccagtgtaacagaagcaacagga
acaagcacgaaatcaccgcagcgcacgcctgcaagcgtgggacgagagtctctaggcaaa
gaaaaacccacaaaggattcactgaagagaggttcccagttccagtgtgacacgtctgca
atgattgatatcgtcctgcttgtggatgggtcttggagcattggacgcaacaatttcaag
ctaattaaggaattcttgagcactttgatttccccgttcagtattgcccaggacaagata
agagtagggctgtcccagtacagcagtgatccccgcacagaatgggatttgaacacttac
actacgagggacgaggtgctggaagccgtgaggaacttgcggtacaagggaggcaacaca
tttacaggtcttgctttgacccatgtcctggaacagaatctaaaaccagaatctggtgcc
cgattggaagcagggaaattggtggtcctcttgactgatggaaaatcccaagatgatgcc
aacctggttgctcagaccttgaaaaacatgggtatagagatatttgccattggggtgaaa
aacgcggatgaggctgagctgaggcaggtggcctcggagcccctggagctcacggtctac
aacgtgctggacttccccttgctgagctccctggttggcaggcttgcccgtgtcctgtgc
gccaggatcaaggagaagaggagcagcgaaagcccaggtagcatccctgtgaacttgagt
ccccagctgagcccaagtgaccttaaaatatcagcggtgacctccaacagcatgcacttg
acctggagtcctcccctgaggccaccaaagaaataccgtattgtgtattatccgtctagg
ggtggcgtccccaaagaggtgcttttagatggagccatctcctctttgcagcttgccaac
ttgacttcgcacacagaatacctggtgtcagtgtctgctctttatgacactggtgtggga
gacagtctgagaggcatcacctccacattgccgttgtctcccgccggttccctgcgcgtc
tccgagctgagtcacaagagcatgaggctgagctggagggcggccccgggagccactcac
tacctggtgctctgctcggcagcccctcggggckcagaggactacacggtggaggtgaaa
gtggcccagcctgaggttctgctcgacgggttgtctcccggcacggagtactcggtcgct
gtgtatgcgatgtacggggaagaggcgagtgagccagccagcatccaggaaaccaccttg
cccttgagccctcccaggtccctgagtttctccgagatcagccacgcgtccgtcagggtg
agctgggaggctgcgtccggggctgccaaagctcatcgtgtgtcctacgtgcccagcaaa
ggcagcagygctgcggagattgaggttcctggcactgcatcctccactgtcctgagacct
ttgtcctcgctcacccaatacttcatcagtgtcaggtctatgtatgatgaaggcgactcc
tttcccgttactggcaatgtcaccacattgaaggtccccccgccgcgtgcactgaaggtt
actgagctctcgggaaacagtctccagctgcagtgggaagctgtcgctgcttcggatgta
gttgtctaccagatcagatggagtccccttggtggagagaaggctcaggagctctccgtt
gctggaaacgtggcgacggccattctgccaagcctgcagaaggacacggactacaggata
tccatgtgggcctattacaaggatggtgctcgaagtgacaccgtttccgttcagcacagg
accaattcccggaacccacccaccaacctcttcattgactcggagacccccaccagcctc
caggtccgctgggacccccccgacggccgcgtgcagcactacaaaatcgtctacagcccc
gtttctgatagccgcgctcagcaaacagtaatggcttctggcaaaagcagcagtgtcacc
ctgcagtccctgctgcccgaccgagcctacaaggtgaccgtttctgctgtccacaacacg
ggcgagagcgaaagcaggaccacaacaggccgcacggctcctgtgttgtctaaacaccct
tcaataagaggatttgttccatctaaagcagaggcctgccccaccatcagctctcctgaa
ggctcggtgcgaggatttgatatgatggaagtttttggattggtagaaaaggaatatgcc
tctattaaaggagtagctatggagccttttgtgttcagcggttcccggacctacactctc
ttcaaagatattcagctcacgcagagaaccagtgacgtgcacctctttgccatcccacct
gagcacaccatcatcatcctcctccgcctcctgcccgacacctccaaggagccctttgca
gtgtggcaaataaccgacgaggacttccagcccctgcttggtgttatccttgactccagt
aagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaagcctccttt
gaccaacaggaagtgaagaagattttctatgggagctttcataaggtgcacgtggccgtg
agccatttcaaggtcaaactctacctggattgtaagaaaatagcagagaaacctgtcaac
accatgggtagcatctccactgctggcttcgtcatgctgggaaaagtgacaaggacgaga
gggccaaggagcgggtccacatcgtttcagctgcagactttgcggattgtgtgcaacagc
ttaggggcggaggaggacagatgctgtgaccttcctgctttgagggatgaagagacctgc
cctaccttagctcctgcctgcacctgtacgtctggcctcccaggcttaccaggacctcca
gggccccctggcagccctggaaggagaggtccccaaggtgaacaaggagagccaggaccc
aagggtgaaccaggcccacctggacaagtgggaccagagggtcctagtggccagcaaggc
tctccaggttcccaaggaatcacggttcagggacctgtgggaccaccaggaattaaagga
gagaaaggagatactggaagtcctggcatgcagggcattcctggtgtgcaaggagctcct
ggcagggatggtcttcaaggtgcaaagggggtgagagggctcgaaggtacagctgggccc
ccaggaccacctggaccacggggtttccaaggagygacaggctcacgaggcagcagtgga
gagaaaggacctccaggtgacgttgggccaacagggcttccaggtccaaaaggagaaaga
ggagagaagggggaaccacaatccctggccacaatttaccagcttgttaaccaggcttgt
gagcggatgattcagactcatgtgttgaagtttgattcattcattcatgagcatgcaagg
aaaccggttcctgtttgggaagccaagttgaaaccaggagaaccaggaccaccaggtcct
ccaggtccccctgggagcaatggagaaagaggagaaaatggcatacctggacagccgggc
aaagatggatatcctggagaaagaggtgcaccggggcccaagggtgaaaaagggacgtct
ggagccaacgaggaaggaatgcaaggaccacgaggcagaacaggcccaccaggagaaata
gtgctggggaaaccaggtccaaagggttccccaggaaatgctggtcctcaaggttttcct
ggtatcagagggcatgctggacagcctggatatcccgggggttgtgatatctctggatgt
tatgggacaggtaggagagatttcatcccctga
DBGET
integrated database retrieval system
